Papaver somniferum (opium poppy): 113310234
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Entry
113310234 CDS
T05758
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04142
Lysosome
psom04144
Endocytosis
psom05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113310234
04142 Lysosome
113310234
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113310234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113310234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113310234
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113310234
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113310234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
113310234
NCBI-ProteinID:
XP_026414616
LinkDB
All DBs
Position
9:193106958..193117417
Genome browser
AA seq
1702 aa
AA seq
DB search
MAAASAPIAMKETLTLPSIGINPQHITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQIVFWKWI
SPKMLGLVTQTSVYHWAIEGDSQPVKMFERTTNLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQALEAHAASFATFKVPGNETPSTLISFASKTTNAGQVTS
KLHVIELGAQPGKPAFTKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEATSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAHLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYAELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDPRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDSDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADTSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQNIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDASQFLDVIKAAEDGNVYHDLVKYLQMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPLVGDRLYDEALYEAAKIIFAFTSNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKQVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSIYYQNRGCFDQLISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELVYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVSNVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYIEEEDYDRLRESIDM
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWRQSITLSKKDNHYKDAMETCSQSGE
RELAEELLVYFIDQGKKECFASCLFVCYDVIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDRIEAQSEVKAKEKEEKDMVAQQNMYAQLLPLALPAPPGMGGMGGGGYGPP
PPMGGMGMPPMPAFGMPPMGSY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctagcgccccgatcgccatgaaagaaacactaactttgccaagtattgga
ataaatccacagcatataacattcacgcatgtaaccatggaatcggataagtacatttgt
gtaagagaaacatcaccacagaatagtgttgtcattattgatatgagtatgccgaatcaa
ccattgagaagacctattactgctgattctgctttgatgaaccctaattccagaattctt
gctcttaaagctcaactgccgggaaccactcaggaccacttacaaatatttaacattgaa
atgaaagcaaaaatgaaatcacatcaaatgcctgagcagattgtcttttggaaatggatc
tcaccaaaaatgctgggtctagtcacgcagacctcggtgtatcattgggcaattgaaggt
gattcacagcctgtaaagatgtttgaaagaacaactaatttagcaaacaatcaaataata
aactaccgatgtgatccttctgaaaagtggttggtcttaattggtatcgctcctgggtca
cctgagaggcctcaactggtcaaagggaatatgcagctctattccgtggatcagcagcgc
agtcaagcgcttgaagcacatgcagcatcgtttgccacatttaaagttcccggtaatgaa
actccttcaacgcttattagttttgcctcaaagactaccaatgctggacaagttacttcg
aagctgcatgttattgaacttggtgcccagccaggtaaaccagcctttacgaagaaacag
gcagatcttttcttccccccagattttgctgatgacttccctgtggcaatgcagatttca
cataagtatggtttgatatacgtgattacaaagcttggacttctatttgtttatgatttg
gagacggctaccgcggtttatagaaaccgaattagtccagaccctatatttttgacggca
gaagctacatcagttggaggcttttatgctgtcaataggagaggtcaggtgctacttgcg
actgtcaatgaagcaaccatagtgccctttgtcagtggccaattaaacaatctggaactt
gctgttaatcttgcaaaaagagggaaccttcctggggcagagaatttggttgtccagcgg
tttcaagaattgttctcacagacaaaatataaggaggctgcagagcttgctgcagaatct
ccccagggcatccttcgaactcctgatactgttgcaaagtttcagagtgtacctgtgcaa
gctggccaaactccaccgctattgcaatacttcggaacactgttaactagaggaaagctc
aatgcatttgagtctctggaattatcacgtcttgtagtgaatcagaataaaaagaacctt
ttggaaaattggttggctgaggacaagcttgagtgcagcgaggaacttggagatcttgtg
aagaccgtggataatgaccttgccctgaaaatatatatcaaggctagggctacaccaaaa
gtggttgcagcttttgctgaacgaagggaatttgacaagattcttatttactcgaagcag
gttgggtacacacctgattatctcttccttctgcaaacaattctgcgatcagatccccag
ggagctgtcaattttgctctaatgatgtcacaaatggagggaggttgtcctgtagattac
aacacaatcacggatctcttccttcagaggaacatgattcgtgaggccactgcttttttg
ttagatgttctgaagccaaatctaccagaacatgctcacctccagacaaaggtcttggag
atcaatttggtaacatttccaaatgtggctgatgccatcttggctaatggaatgttcagt
cactatgatcgtcctcggattgcacagctctgtgaaaaagctggtctttacgtgcgagcc
cttcagcattatgcagagttgccagatattaaacgtgtcattgtgaatacacatgccatt
gagccacagtcacttgtggagttctttggaaccctctcgaaagaatgggcgttggagtgc
atgaaggaccttttacttgttaatctgaggggaaacctccagataattgtgcagaccgcc
aaagaatattctgagcaattgggtgttgaggcatgcataaaactttttgagcaattcaag
tcttatgagggtttatattttttcttgggatcgtatttaagctccagtgaggatcctgac
attcactttaagtatatcgaggccgcagctaaaactggacaaatcaaagaggttgaacgc
gtgactagagaatcaaacttctatgacgcggagaaaacaaagaattttcttatggaggcc
aagcttcctgatgcaagacccctgatcaatgtatgtgatcgttttggttttgttccagat
ctcacccactatctctacacgaacaacatgctccgatatattgaaggttatgttcagaag
gtcaatccaggaaacgctccattagttgtgggtcagctacttgatgatgaatgccctgaa
gatttcattaaaggacttattctttctgtccgctctcttcttccagtggaaccccttgtt
gatgagtgtgaaaagagaaatcgcctgcgtttactaacccaattcttggagcatcttgtg
agtgaaggaagccaagatgtacatgtccacaatgctttaggtaaaataatcatagacagc
aataacaatcctgagcattttctcacgaccaacccatattatgatccacgagtggtgggt
aaatactgtgagaaacgtgaccctactttggctgttgttgcttaccgaagagggcagtgt
gatgatgaacttatcaatgttacaaataagaactcactgttcaaattacaggccaggtat
gtggtggagaggatggattctgacctctgggaaaaggttctcaatcctgagaatgagtac
agaagacagcttattgatcaagttgtatcaactgccttgcctgaaagcaagagcccggag
caagtttctgcaactgttaaagcttttatgactgctgatcttccacatgagctaatagag
cttctcgaaaagatcgtgcttcaaaactccgccttcagtgggaactttaatttgcagaat
ctgctgatcctcacagccattaaggcagacacgtcaagagtgatggattacataaacaga
ttagacaatttcgatggacctgcagttggagaggttgctgtggaggcacagctctatgaa
gaagcatttgccattttcaagaagttcaacttgaatgtacaggccgtgaatgttcttttg
gataacatccaaaacattgaacgagctgtggagtttgctttccgtgttgaagaggatgct
gtttggagccaggtagcgaaggcccagctcagggagggactagtgagtgatgcaattgag
tcatttatccgtgcagatgacgcttctcaatttttagatgtcattaaagctgccgaggat
ggtaatgtctaccatgatttggttaagtacctccagatggtaaggcagaagtctaaggag
cctaaagtagacagtgagcttatttatgcatatgccaaaatcgacaggctcagtgacatt
gaagaatttattctcatgcctaatgttgctaatctaccacttgttggcgaccgtttatat
gatgaagcgctatacgaggctgcaaagattatatttgcttttacttctaactgggccaag
ctggctgtcaccctcgtcaagttgcaacaattccaaggtgcagttgatgcagctagaaaa
gccaacagcgcgaagacatggaaacaagtctgctttgcatgtgttgatgctgaggagttc
cgtttggctcagatatgtgggcttaacatcattgtacaggtggacgatctggaggaagtc
agtatttattaccagaataggggctgctttgatcagcttatatctttgatggagagtggt
ctaggcctggaacgtgcgcacatgggtatctttactgagttaggagtcctttatgcgaga
taccgttatgagaagcttatggagcacattaaattgttctcaacacgtcttaacattccc
aagcttataagagcttgtgatgaacaacagcactggaaggaacttgtttatctgtacatc
cagtatgacgagtttgacaatgctgcaaccactataatgaatcattctccggatgcgtgg
gaccacatgcagttcaaggatgttgcagttaaagtatcgaatgttgagctttactacaaa
gctgtacatttctacctgcaggaacatcctgaccttattaatgatatgctcaatgtactc
gcccttcgcgtggatcatactcgcgtcgtggacattatgcgaaaggctggtcatctgcgt
cttgtgaagccttacatggttgcagttcagagtaacaacgtatctgctgtgaatgaggca
ctgaatgagatctatattgaggaggaggactatgataggttgcgtgagtcaatcgatatg
catgataactttgaccagattggtcttgcacagaagattgagaaacacgagcttcttgag
atgcggcgagttgctgcttacatctacaagaaagcaggtcgatggaggcaatctattacg
ttatcgaagaaagacaatcactacaaagatgcaatggagacttgttcgcagtctggtgaa
cgcgaacttgcagaagaattgcttgtttatttcattgatcagggaaagaaggagtgtttc
gcctcatgcttatttgtttgttatgatgtgatacgaccggatgttgcacttgagcttgca
tggatgaacaacatgatagacttcgctttcccctatctcttacagtttatccgtgagtat
acaggcaaagttgatgagcttgtcaaggatagaattgaagctcaaagtgaagttaaagcc
aaagagaaggaggagaaggatatggttgctcaacagaacatgtacgcccaactgcttcca
ctagccttgcctgctccaccagggatgggaggcatgggtgggggaggttatggtccccca
ccacctatggggggaatgggtatgcctccaatgccagctttcggaatgcctccaatgggg
agctattga
DBGET
integrated database retrieval system