Papaver somniferum (opium poppy): 113310331
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Entry
113310331 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113310331
03036 Chromosome and associated proteins [BR:
psom03036
]
113310331
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113310331
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113310331
SLIK complex
113310331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Allexi_40kDa
KH_PARP14_5
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
113310331
NCBI-ProteinID:
XP_026414751
LinkDB
All DBs
Position
9:83854372..83870119
Genome browser
AA seq
1736 aa
AA seq
DB search
MALFRNYSNGMSSQNDYSERSEDCYVEPAHVSVGNEDADAGTSSSGSDQDVELNIDDSEG
EQDVGSRIEDETTSLRIENSRPSETRTAQVGKWGSSFWKDCQPLGPQERSQAARDSKNMG
SNCRSEDVFGNYDLNDEEDRLQTEDYDAQAEADELQRSQADVPAEEMLSDDYYEQDGEEP
SDSMHYRGMNRSTASSSKPQSGSTSVNNNMPRGSKAAKVKQYGDEDDDYEDEDDDEDEED
EDDPDDVDFEPDFGGLTNSHTRNKDKGWDDDGSDEDDDHDDELISDEDDLDYNGKSRRKG
QNKGGCSRKGRENKSFSANTRPKRKKTFWEAEDSSAKESDSDSGDDFKTNRGRAAANFRK
TSGGRSTVSGNARSQNGEVRSSNRSTRKVSYAESEESEEIEDGNAKKAGLKEDIEEEDSD
YIERVLWHQPKGMAEEALNSNKSTQPSVLSHLLDSEPDWNETEFFIKWKGQSYLHCQWKS
FSELQNLSGFKKVVNYTKRVKEERRYRMNLSREEVEVHDVGKEMELDLIKQYSQVERIFA
DRIKGGSDDVTPEYLVKWQGLSYAEATWERDIDIAFAQDVIDEYKAREAAMTVLGKMVDF
QRKKSRDSLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV
SMLGFLQNAQQIHGPFLVVVPLSTMSNWAKEFKKWLPEMNVVVYVGNRASREVCEQHEFY
TNNKSGRSIKFNALLTTYEVVLKDKAVLTKIKWSYLMVDEAHRLKNSEASLYITLSEFST
KNKLLITGTPLQNSVEELWALLHFLDPVKFKSKDEFSEKYKNLSSFNELELANLHKELRP
HILRRVIKDVEKSLPPKFERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV
VELKKCCNHPFLFESADHGYGGNTSINESSKLERTILSSGKLVILDKLLVRLRETKHRVL
IFSQMVRMLDILADYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGG
LGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKK
KMVLDHLVIQKLNAEGRLEKKETKKGGSLFDKNELSAILRFGAEELFKEDNNDEENKKKL
LSMDIDEILARAEKVESKAAEAEEGGELLSAFKVANFGSTEDDGTFWSRWIQPEAVDQAE
DALAPRAARNTKSYAEANPPDKSTKRKGREVESNNRVPKRRKADVAVNTPPMIDGAVAQV
RAWSYGNISKKDAGLFVRAVKKFGNQNQISLIVAEVGGAIGAAPSRAQVELFEALIDGCK
EATKGGSFDTKGTLLDFFGVAVKANELLDRVKELQLLAKRIKRYQDPVTQFRLLMHFRDP
QWSKGCGWNQIDDARLLLGVHYHGFGNWEKIRLDSKLGLTWKIAPVELAQRETFLPRAPN
LDQRASALLRKEFAAAGGKSATKPRRKAAKNEGGNMLKISNARFKDMKSKPSKRNVRANK
DPVQKQAAVEPAVKEEGEMSDTELYQQFKEEKWMEWCADVMIDVERTLKRLEKLQHTSAN
LPKEKVLSRIRNYLQLVGRKVDEIVQQHELNKQSRMITRLWNYVSTFSNLSGEKLQQIYS
KLKKEQQSEAGVGPSYLNGSAPDHYPNDRDNSSMQYPPYGQNIPNPRFQKHPPHRASESF
HRDQESAKSEAWKRRRKTDGDSHSPYKQPPLENIRLREPSAAPGILGWGPSDNRHK
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggccttgttcagaaattattctaatggaatgagttcacagaacgattatagtgaaaga
agcgaggattgctatgtcgagccagctcatgtttcagtagggaatgaagatgctgatgct
ggtacaagttctagtggcagtgaccaggatgttgaactaaatatagatgatagcgaggga
gagcaagatgtgggaagtagaatagaagatgagacaacttctttgagaatagaaaactct
cggccgtctgaaacgagaacagctcaggttgggaaatggggttcctcattttggaaggac
tgtcaacctctgggccctcaggaacgatctcaagctgcaagagattcgaagaacatgggt
tctaattgtagaagcgaggatgtatttggtaactatgatttgaatgatgaggaagatagg
ctacagacagaagattacgatgcacaggctgaagcggatgagctccaaaggagccaggct
gatgtgcctgcagaagaaatgctgtctgatgattattatgagcaggatggggaagagcca
agcgattctatgcattatagaggaatgaatcggtcgaccgcttctagttcaaagcctcag
tctggatctacctctgttaataacaacatgcctaggggttctaaggctgctaaggtcaag
caatatggcgacgaagatgatgattatgaagatgaagatgatgacgaagatgaggaagat
gaagatgatcctgatgatgtagattttgagcctgattttggtgggctgacgaacagccac
acgaggaataaggataagggatgggatgatgatggttctgacgaggatgacgatcatgat
gatgaacttatctcagatgaagatgatttggattataatgggaaatctcggcgtaaagga
caaaataaaggtggctgcagtagaaaaggcagagaaaataaatcattctccgcaaatact
cgtccaaaaagaaagaaaaccttttgggaagctgaggattcatctgcaaaggagtctgat
agtgatagtggtgatgactttaaaaccaatagggggagggcagctgccaattttcgcaag
accagtggtggtcgatcaaccgtgtctggaaatgccagaagccaaaatggtgaggttcgc
agttcaaatcggtcaacacggaaggtatcgtatgctgaaagcgaagaaagtgaagaaata
gaggatggaaatgcaaaaaaggctggcctaaaggaagatattgaagaggaagacagtgat
tatattgaaagggtactgtggcatcaaccgaagggaatggctgaagaagctttaaatagc
aataagtctacccagccatctgtattgagccacttgttggactctgaaccagattggaat
gaaacagaattctttataaaatggaaggggcagtcttatttacactgccagtggaaatca
ttttcagagctccaaaatcttagtgggttcaaaaaggtcgtgaactacaccaaaagagtg
aaggaggaaaggagatatagaatgaatctgtctcgagaagaggttgaggttcatgatgtg
ggcaaagaaatggagttagatcttatcaagcaatacagtcaggttgaacggatatttgct
gatagaatcaaaggtggttcagatgatgtgactccagagtatctggtcaagtggcaggga
ctatcctatgctgaagcgacctgggaaagggacatagatattgcatttgctcaggatgtc
attgatgagtacaaggccagggaggctgcaatgaccgtcctaggaaaaatggtggatttc
cagcggaaaaaaagcagagatagtcttaggaagctggatgaacaacctgactggctgaaa
ggaggaaaacttcgcgattatcagcttgaggggttgaattttcttgttaatagttggaga
aatgatacaaatgttattctggctgatgaaatggggcttggtaagactgttcagtctgtc
tcaatgctgggatttctacagaatgcgcaacaaattcatggtccatttcttgtcgttgta
ccgttgtcaactatgtctaactgggcaaaagaatttaagaagtggcttcctgaaatgaac
gttgttgtatatgttggaaatcgtgctagtcgagaggtttgtgagcagcatgaattttac
acaaataacaaaagcggcaggagtatcaaattcaatgctcttttgacaacatatgaagta
gttttgaaggacaaagctgtattgaccaaaattaagtggagctaccttatggttgatgag
gcacacaggctgaaaaatagtgaagcttctctttatataacattatcggaatttagcacc
aagaacaagttactgatcaccggtactcctttacaaaacagtgtcgaagaactatgggcc
ttgcttcatttccttgaccctgtgaagttcaagagcaaggatgagttttccgagaagtac
aagaacctgagctcttttaatgaacttgagcttgcaaatctgcataaggaactgaggccg
cacattctgcgaagagttattaaggatgttgagaagtccttgcctccaaaattcgaacgt
attcttcgggttgaaatgtcccctcttcagaagcagtattataagtggattttggaacgt
aactttcatgacttgaacaaaggagtccgtggaaatcaggtttctctgttaaacattgtg
gtcgagttgaagaagtgttgcaatcatccttttctgtttgaaagtgctgatcatggatat
ggtgggaacacaagcattaatgaaagcagcaaacttgagcggaccattttaagcagtggg
aaattggtaatacttgacaagttgttagtgcgcttgcgtgagacaaaacatcgtgtttta
atattttctcagatggttaggatgttggatatactagcagactatttatcacttagagga
tttcaatttcaaagacttgatggtagtactagggcggaccttcgtcatcaggcaatggaa
cattttaatgctcccggaagtgatgatttttgcttccttctgtcaactcgtgctggtggt
cttggcatcaatcttgctactgcagatactgtaataatatttgattcagactggaatccc
caaaatgatttacaggctatgagtagagctcatagaattggtcaacgagaagttgtaaac
atttaccggtttgtgaccagtaaaagcgtcgaggaagatattctggaacgtgctaagaag
aaaatggttcttgatcatctggtcatccaaaaactaaacgcagaaggtaggcttgagaag
aaagaaacaaagaaaggaggttctttgtttgataaaaatgaactctcagctattctaagg
tttggagcagaggaactgtttaaggaagacaacaatgacgaagaaaacaagaaaaaactt
cttagtatggatattgacgagattcttgcaagagcagagaaggttgaatctaaagcagct
gaagcggaagaagggggggagttattaagtgcttttaaggttgcgaacttcggtagtact
gaggatgacggaactttctggagccgttggattcaaccggaagctgttgatcaagcagag
gatgctctagctcctcgtgctgcaaggaataccaagagttacgcggaggctaatccacca
gataaaagtacaaaaaggaaaggtagagaagttgaatctaataatagagttccaaagcgc
aggaaagcagatgttgctgtaaacactccacctatgattgacggggcagtagctcaagtg
agggcatggtcatatgggaacatttcaaagaaggatgctggcctttttgtccgtgcggtt
aagaagtttgggaatcagaaccaaatcagcctaatagttgccgaggtcggtggtgcaatt
ggagcagctccttctcgtgcacaggttgagctgtttgaagctttgattgatggttgtaaa
gaagcgacaaaaggaggaagctttgataccaaggggacgcttctggatttctttggtgtt
gctgtaaaagcaaacgaattgctagatcgtgtaaaagaacttcagctcctagcaaagcgc
attaaacgatatcaagatccagttacgcaattccgactgctaatgcattttagagatcca
cagtggtctaaagggtgcggttggaatcaaattgatgacgcaaggttgcttcttggtgta
cactaccatggctttgggaactgggaaaagatcagattagactcgaagcttggtcttact
tggaaaattgctccagtagaacttgcacaacgtgaaacctttttaccacgtgctcctaat
ttggatcaacgtgcttctgcacttctgcgtaaggaatttgcagcagctggtggtaaaagt
gcaactaaaccgaggcggaaggccgccaaaaatgaaggtggtaacatgctcaagatctca
aatgctcgctttaaggatatgaaatctaaacctagtaagcgaaatgtccgagcaaacaaa
gacccagtgcaaaaacaggcggctgttgaacctgctgtcaaagaggagggtgaaatgtca
gatactgaactgtatcagcaatttaaggaagaaaaatggatggaatggtgtgcagatgta
atgattgatgtggagagaaccctcaaacgcttggagaagttgcagcatacaagtgcaaat
ctaccgaaggaaaaggtgctttccaggattcggaattatctacaacttgttgggagaaag
gtagacgagattgttcagcagcacgaattgaacaagcaatctagaatgataacaagacta
tggaactatgtttccaccttttcaaacctatctggggagaagcttcagcagatatattct
aaacttaaaaaagagcagcagtctgaggcaggtgtggggccatcctacctaaatggatct
gcacctgatcactacccaaatgatagagataatagttccatgcagtatcctccgtacggc
cagaatattccaaatccaaggtttcaaaagcatccacctcaccgcgcttcagaatcattt
catcgagaccaggaaagtgcgaagtcagaagcatggaagcgaagaagaaaaactgatgga
gattcgcattctccctataaacaacctccattggaaaacattaggttaagggaaccaagt
gctgctccaggaattctcggttggggtccatcagataacagacataagtga
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integrated database retrieval system
