Papaver somniferum (opium poppy): 113310341
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Entry
113310341 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113310341
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113310341
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113310341
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113310341
NCBI-ProteinID:
XP_026414769
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All DBs
Position
9:17780452..17787232
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AA seq
783 aa
AA seq
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MATKAKASLFSSKKKLIRSIKKTADDVDSLPWKSSVSQDDDPLALPQGANDFDGGFISLE
EIDEVDYGVLINNPFESKKRLRTEDSGDNEEKVDKKVKKPKAKKKKKNKSVIVSEGDSTS
LGVVKDDSDIKVEIAETVVDEAEFYEWKALRLHPLLLESIYKLGFKEPTPIQKVCIPAAA
HQGKDVIGAAETGSGKTLAFGLPILQRLLQEREKAGVSLTERRNDVEKGALGSTLRALII
TPTRELAFQVTNHLKVASSLTNIRVVSIVGEISPEKQERLLKARPEIIVGTPGRLWEFMQ
GGNPHLVELHSLSFFVLDEADRMIESGHFQELQSIIDMLPMTAAPDEGKFENSQSCVTVS
NIQRKKRQTFVFSATIALSSDFRKKLKGGSRKSKQSLNGELSSIEKLSERAGMRADAAIF
DLTNAAVMADKLEESFIECREEDKDAYLYYLLSVHGQGRTIVFCRSIAALRRIYSLVRLL
GINLWSFHADMQQRARLKAMDRFRESDNGILIATDLAARGLDIPGVRTVVHYQLPQSADA
YVHRCGRTARASADGCSIALINPKDKPKFSSLCKSLQKVSLRRFPLDNSYMPEIMKRLSI
ARQIDKIMLKDSKEKVNKAWLERNAKSVDLVVDEDDSEEERVNSHKQRKVTSSRLIKLQT
ELKSLLSRPLQPKSFSHRFLAGSGVSPLLQRQLQELSAKQYGATSGNVGENRKRKLVVIG
QDCMEPLQALRSGGHEVSMNVKETSGSGRNIIENAKRKKRETKNRARDQKRRDVKRLKSR
RAF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaagctaaagcttcacttttttcatcaaagaagaaactgataagaagtatc
aaaaaaacagcagacgacgtagattcattaccatggaaatcttctgtttctcaagatgac
gatcctttagctcttcctcaaggagctaacgattttgatggcggttttatttctcttgaa
gagattgatgaagttgattatggtgttttgataaataatccttttgaatccaagaaacgg
cttcgtactgaggactctggcgacaatgaagagaaagttgacaagaaagtaaagaaacca
aaggctaagaagaagaagaaaaataaaagtgtcatagtttctgaaggggattctacgagt
ttgggtgtagtaaaagacgatagtgacattaaagttgagatagcagagacagtagttgat
gaagctgaattttatgagtggaaggcattgaggcttcatccattgttattggaatcgatt
tacaagcttgggtttaaagaacccacacctattcagaaagtttgtattcctgctgctgca
catcaaggaaaggatgtgattggtgcggcggaaacaggatctgggaaaacacttgctttt
gggcttccaattttacaacgtctacttcaagagcgagaaaaagcaggcgtatcacttacg
gagagaagaaatgatgtggaaaaaggagctcttggaagtacacttcgggcgctcatcata
actcctacaagggagctggcattccaggttactaatcatctcaaggtggctagtagcttg
acaaacatcagggttgtctcaattgttggtgagatttcgccagaaaagcaggaaagactt
ctaaaagcaaggcctgagattattgttgggactccagggaggttatgggagtttatgcaa
ggagggaatccacaccttgttgagttacattcgctgtcattctttgttctagatgaggct
gaccgtatgatagagagtggtcattttcaagagttgcagtctatcattgacatgttacct
atgactgctgcacctgatgaagggaagtttgaaaattcacagagttgtgtaacggtttca
aacatccaaaggaagaaaaggcaaacattcgtcttttctgccactatagcattatcttct
gattttcgtaaaaagctaaagggtggatctcgtaaatccaaacaatctttgaatggcgag
ttgagctctatagaaaagctttcagaacgagcagggatgagggcagatgccgcaatcttt
gatttgacaaatgctgcagttatggcggataaattagaagagtcgtttattgaatgcagg
gaagaagataaagatgcctatctatattatcttttgagtgttcacgggcaaggccggact
attgttttctgtaggtcaatagcagctttacgtcgtatttattcgcttgtgcgcctcctt
ggcattaatctgtggtcttttcacgctgacatgcagcagcgagcacgcttgaaggcgatg
gatcgttttcgtgaaagcgacaatggtatacttattgctactgatcttgcagcaagaggt
cttgatatccctggtgttcgaaccgttgtccactatcaacttccacaatcagctgacgct
tatgtgcacagatgtggaagaactgctagagcatctgcagacggttgcagcattgcatta
atcaatccaaaggataaaccaaaattttcatccttgtgcaaatctttgcaaaaggtaagt
cttcgacggtttcctttagataactcatacatgccagagattatgaaaagattatctatt
gcgcgccagatagataagatcatgctcaaggattccaaggaaaaggtaaacaaagcctgg
ttagaacgtaatgccaaatcggtagatttggttgtagacgaggacgacagtgaggaagaa
agagtgaatagtcataaacaaagaaaagtcacctcgtctagattaatcaagctgcagacg
gagttgaagagcctgctttccagacctttacagccaaaatcattctcacatcgctttttg
gctgggtctggcgtttcgcctctactccaacgccaattgcaagaattatcagcgaagcag
tatggagccacttcaggcaatgttggagaaaacagaaaaaggaaactagttgttattggg
caggattgtatggagccacttcaggcacttcgtagcggcgggcatgaggtttccatgaat
gtgaaagagacgtcgggaagtggaaggaacatcatcgagaatgcaaaaagaaagaaaaga
gaaactaaaaaccgtgcccgtgaccagaagagaagagacgtgaaaagactgaagagtaga
agagctttttag
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