Papaver somniferum (opium poppy): 113310345
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Entry
113310345 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113310345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113310345
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113310345
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113310345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
113310345
NCBI-ProteinID:
XP_026414777
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All DBs
Position
9:complement(180825903..180829611)
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AA seq
308 aa
AA seq
DB search
MAPGGRICKEVPESHSMFSDYGIATSNGESKISPSTKTPIVPGGKYVFSSTTGVHDLLEC
PVCMSSMYPPIHQCPNGHTLCSDCKARVHNCCPTCRYELGNIRCLALEKVAESLELPCRH
QALGCHDIFPYYSKLQHEQHCRYRPYNCPYAGSECSVTGDIPILVGHLKDDHKVDTHDGC
TFNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFQMGMAPVYMAFLRFMGDEDDAK
KFSYSLEVGGNGRKLMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDRQELKLRV
TGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggccgaatctgcaaggaagtccccgagtctcattctatgttttctgat
tatggtattgccacttcaaatggcgaaagcaaaatttctccatcaaccaagaccccaatt
gttcctggcggaaagtatgtattctcatcaactactggtgtacatgatctacttgagtgc
cctgtttgcatgagctcgatgtaccccccaatacaccagtgtccaaatggccacactctg
tgttcagattgcaaggctcgagttcacaactgctgtccaacttgtcgatatgagcttggc
aacataaggtgcttggctttggagaaggtagcagaatcgctggaactcccttgcagacat
caggccctaggttgtcatgatatatttccatactacagcaaactccagcatgaacagcac
tgccgatatcgtccatacaattgtccttatgctggatctgaatgctctgtcaccggggac
attccaatccttgttggtcatctaaaggacgatcacaaggttgatacacatgatggatgc
accttcaaccatcggtatgtcaaatccaatccgcaggaggtagaaaatgctacatggatg
ctaactgttttcaattgttttgggagacagttctgcttacactttgaggcttttcaaatg
ggaatggcacctgtatacatggcctttttgcgattcatgggcgatgaagatgacgcaaag
aaatttagttatagtttggaggttggtgggaatggtcgaaagctaatgtggcagggagtt
ccaaggagtattcgcgatagtcataggaaggttagggatagtcaagatggattaatcatt
caaagaaacttggctttgttcttttctggtggtgatcgacaagagttgaaattgagagtc
acgggccgtatatggaaggaacagtag
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