Papaver somniferum (opium poppy): 113310842
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Entry
113310842 CDS
T05758
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113310842
Membrane trafficking [BR:
psom04131
]
Autophagy
Other autophagy associated proteins
Others
113310842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
WD40
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
CPSF_A
Beta-prop_IFT80_2nd
CFAP251_N
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
113310842
NCBI-ProteinID:
XP_026415426
LinkDB
All DBs
Position
9:complement(104297503..104301585)
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AA seq
393 aa
AA seq
DB search
MSEPLLLQPSVPYPPSELDVNDNDGMELLSASWNQDYGCFAAGTSRGFRIYNCDPFKEIF
RRDLKSGGFGIVEMLFRCNILALVGGGSNPQYPPNKVMIWDDHQSRCIGEFSFRSDVRAV
KLRREHIVVALEHKIYVYDFTDLKLLHQIETFSNPRGLCCLSHHSNTSVLACLGLQRGQV
RIDHFGLKMSKLIDAHDSSLACFTLTMDGLLLATASTKGTLVRIFNTMDGTRLQEVRRGV
DRAEIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEESSNHYSTAQSPTVHQNFSNNL
LSPNTGGNPGSSLSFMKGMLPKYFSSEWSFAQFFVPENNRFVAAFGSQNSVMIVGMDGSF
YRCTFDPLNGGEMSQQEYIRFLKIDNRPKSGTT
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacccctgcttcttcagccttcggttccttaccctccatctgaattggacgtt
aatgacaatgatgggatggagcttttgtcggcatcctggaatcaggactatggatgcttt
gctgctgggacaagccgtggttttcggatttacaattgtgaccctttcaaggaaattttc
aggagggatttgaaaagtggggggtttgggattgttgaaatgctgttccgctgcaacatt
ctggccctcgttggtggtggatctaatccacagtaccctcctaacaaagttatgatttgg
gatgatcaccagagccgatgcattggtgaattttcgttcagatctgatgtacgtgccgtg
aaacttagaagggaacacatcgttgtggctcttgaacataagatatatgtttatgatttt
acggatctgaagcttcttcatcaaatagagacattttcaaacccaagagggctttgttgc
ctttcacaccattcaaatacctccgtgttggcttgcttgggtctccagcgagggcaggta
cgaatagatcactttggattgaagatgtcaaaattgattgatgctcatgactctagcttg
gcatgctttaccttaactatggatggacttcttcttgctactgcaagtacaaaaggcact
ttggttagaattttcaacacaatggatgggactcgcttacaagaggtccgcaggggggtg
gacagagcagaaatatacagtattgcactctctccaaatgtccagtggttggctgtatcg
agtgacaaaggcacagtccatatcttcagtctcagggtccgagtggtgggggaggaatca
tctaaccattacagcactgctcaatcgcctactgtccaccagaacttttctaataatctt
ctatccccaaatactggtggtaaccctggatcatccctttcttttatgaaaggaatgtta
ccaaagtattttagctcagaatggtcatttgcccagttctttgtaccagaaaacaaccgg
tttgttgcagcatttgggtctcagaactctgtcatgattgttggcatggatggcagtttc
tataggtgcacttttgacccattaaatggaggggagatgtcgcagcaagagtacatcagg
tttctgaaaattgacaataggccaaaatcaggaaccacttga
DBGET
integrated database retrieval system
