KEGG   Papaver somniferum (opium poppy): 113310873
Entry
113310873         CDS       T05758                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113310873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113310873
   03036 Chromosome and associated proteins [BR:psom03036]
    113310873
Spliceosome [BR:psom03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113310873
 Complex B
    113310873
 Complex C
   U2 SnRNP specific factors
    113310873
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    113310873
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N ORF29 DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 113310873
NCBI-ProteinID: XP_026415474
LinkDB
Position
9:72350957..72355958
AA seq 1272 aa
MDPEIAKTQEERKKMEKQIASLSTVTFDTEFYDSTGNRYEGYVSSIAVNEEEETVDPSLS
DVPRRLASYTAPQSLMKDIAGSAEEHNNNNSLGPRKIIDREDEYRRRRLNQVLSPDRVDA
FALGDETPDPSVRTYAEIMREQSLKRETEETLREIGKKKKEEEEEKERGGGRKVEERERD
EVPAPVPKRRNRWDQNQDVDAASKKAKTSSSDWDIPDSTPGIGRWDATPTPGRIGDATPS
LSRRNRWDETPTPGRVADADATPSAGVTPAATPSGMTWDSTPKLAGLATPTPKRQRSRWD
ETPMSVGSATPMPGATPSGIYTPGVTPRGGGELATPTPGAFQAITPEQYNLMRWEKDIEE
RNRPLSDEELDSMFPQEGYKILDPPASYVPIRTPARKLLQTPTPLGTPLYQIPEENRGQQ
FDVPKEAAGGLPGMKPEDMQYFGPLLNEVDEETLSPDEQKERKIMKLLLKVKNGTPPQRK
TALRQLTDKARDFGAGPLFGRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHK
ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFS
VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLKSLVEIIEHG
LVDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI
IPLMDAIYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPE
FFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIE
KVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQI
CGTVKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGS
ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA
REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKTIGPQDVLATLLNNLKVQERQNRVCT
TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL
LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVME
AIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLEDEES
NVFSRPELVMFV
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggatcctgagatagctaaaacccaagaagagaggaagaagatggagaaacaaatcgct
tctctctcaacagttacttttgatactgaattttatgatagtactggaaatcgatacgaa
ggttatgtaagttcaattgctgtaaatgaagaagaagaaactgtagatcccagtttatct
gatgttcctagaagattagcttcttatactgcacctcaatcattaatgaaagatattgca
ggaagtgctgaagagcataataataacaacagcttggggccgagaaaaattattgataga
gaagatgagtatagaaggagaagattgaaccaagtactctcacctgatcgagttgatgct
tttgcattgggagatgaaactcctgatccatctgtcaggacttatgcggaaattatgagg
gaacaatctttgaaaagagagacagaagagactttgagagaaattggtaagaagaagaag
gaagaagaagaggagaaggagagaggcggtggtaggaaggttgaagagagagagcgagac
gaggtacctgctcctgtacccaaaagaaggaataggtgggatcaaaatcaggatgttgat
gctgctagtaagaaagccaagacttcttcgtctgattgggatattccagattcaactcca
ggtattggaagatgggatgcaacacctactccagggaggattggagatgcaactccttcg
ctatctagaaggaataggtgggatgaaacaccaacccctggtcgggttgctgatgcagat
gctactccgtccgctggtgtaactcctgctgctactccctctggtatgacttgggattct
acacctaaacttgccggtcttgctactccgactcccaaacgtcaaagatcgagatgggac
gagactcctatgagtgtgggcagtgccactccaatgccgggtgcaactccatctggtatc
tacactccaggagttacacctcgtggaggaggtgagctggctaccccaactcctggggct
tttcaagcaatcacacctgaacagtacaatttgatgagatgggagaaggatattgaagag
agaaataggccattaagtgacgaggaacttgattcaatgtttccacaagaaggatacaaa
attttggatcctccagcatcttacgttccgattagaactccagccaggaagcttcttcaa
actcccactccgttgggcaccccactttatcaaatcccagaagagaaccgtgggcagcaa
tttgatgttccaaaagaagcagctggagggttgccagggatgaaaccagaggatatgcag
tattttggaccattgctgaatgaagttgatgaagaaacgttgtcgcctgatgagcagaaa
gagaggaagatcatgaaactactgctaaaggtcaagaatggaacacccccacagaggaaa
actgcattgagacagttgactgataaagcgcgtgattttggtgctggcccactctttggc
aggatattgccattacttatgcaaccgacgttggaagatcaagaacgacatcttctagtt
aaggttattgatagggttttgtacaagttggatgagcttgttagacctttcgttcacaaa
atccttgtggtgattgagcctcttctgatcgatgaggactattatgctcgtgttgaggga
agagaaattatttccaacctgagtaaagctgctggtttggctactatgattgctgcaatg
aggcccgatattgataacattgatgagtacgtgaggaacacaactgcgagggctttcagt
gttgttgcttctgctctggggattccagcgctgcttcctttcttgaaagctgtctgtcag
agtaagaaatcttggcaagctcggcacactggtatcaagattgttcagcagattgctatc
ttaattggttgtgcagtacttccccatttgaagtctcttgtggaaatcatagaacatggt
cttgtggatgagaaccagaaggtcaggaccattactgcactgtcgttggctgccctggct
gaagcttctgctccatatggtattgaaagttttgattctgtcctgaagcctttgtggaag
ggtatcagatcacacaggggtaaggttttggctgccttcttgaaagcaattggttttatc
attcccctcatggatgcgatatatgctagttactataccaaggaagtgatgttcatattg
atccgtgagttccagtctcctgatgaagaaatgaagaaaattgtgctcaaagtcgttaag
cagtgtgttagtacagaaggtgttgaagctgattatatcagaagtgatattcttccggag
tttttcaagaacttttgggtgagaagaatggcattggaccgtagaaactataggcagcta
gtggaaaccactgtggagatcgcaaacaaggtcggtgttgccgatatagtgggaagaatc
gttgaggatcttaaagatgagagtgaaccttacagaagaatggtgatggaaactattgag
aaggtggttgcgaacttgggtgcatctgatatcgatgcacgcttggaagaacttcttatt
gatggtatactgtacgctttccaggagcaaactagtgacgatgctaatgttatgttgaat
ggatttggggctgttgtgaatgccctggggcagagagtgaaaccctatcttcctcagata
tgtggtaccgttaagtggcgtttgaacaacaagagtgcgaaggttagacaacaagcagca
gatctcatttctaggattgctgttgtgatgaagcaatgccaagaagagcagctgatgggt
catcttggtgttgttttgtacgagtacttgggagaagagtaccctgaagttctgggatcc
attttaggagctctgaaggcaattgtgaatgttatcggaatgacaaagatgacaccgcca
atcaaagatctgcttcctcgattgactcctattttgaagaatcgacatgaaaaagttcaa
gagaactgcattgatcttgtcggtaggattgccgatcgtggagctgaattcgttcctgcg
agggagtggatgagaatatgttttgagcttcttgagatgctaaaagcccacaagaaagga
attcgaagggctactgtcaacacatttggatacatcgcgaaaaccattggaccccaagat
gtcctggcaacattgttgaacaacctcaaagtgcaggagcgtcagaaccgtgtatgcaca
actgtagctattgcaatagttgcggaaacttgttctccattcacagttctgccagctctt
atgaatgagtatcgtgtgccagagctgaatgtgcaaaatggcgtcttaaaatcactttcg
ttcttgttcgagtatattggcgagatggggaaggattatatatatgctgtgactcctctt
cttgaagatgcgttaatggatagggatctggttcacaggcaaacggcggcctccgctgta
aagcacatggctttaggcgtggcagggttaggctgtgaagatgctttagttcatcttctg
aattatgtctggccgaatatatttgagacttctccccatgttattaatgctgtaatggaa
gcaattgaaggaatgagggttgccttaggggctgctgcaattttgaattactgtttgcag
ggactttttcatccagcacggaaggtcagggaggtgtattggaagatttataactcactg
tacattggagcgcaggatgcccttgtagctgcgtacccggtgttggaggatgaggagagc
aatgtatttagcaggccggagttggtgatgtttgtatga

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