Papaver somniferum (opium poppy): 113310944
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Entry
113310944 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113310944
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113310944
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113310944
NCBI-ProteinID:
XP_026415553
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Position
1:196278635..196286344
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AA seq
705 aa
AA seq
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MNVHERKKVKAMKNSIDAYVQYPYSWTKKKNSGVVLWWMAFLSVLSLSITSVESLAARNF
PSVANANVKGSNSGLKLLVQGKYVVMENSFVRVNLSNPDGLVTAVQYHGIDANLLEIRDT
EDSRGYWDVVWGEPGHKDYFDKLKATTFKVIVQNENQIEVSFSWKWDISLKGKLAPMNLD
KRYIMLKDSSGFYTYGIFDHPKGFPEFSLAEARVAFKLSSAMFHHMTVSDTMQREMPAYE
DRQKGQPLAYPEAVLLTNPINPVHKGEVDDKYMYSVENKDTGVHGWISANPRVGFWIITA
SSEFLVGGPHKQDLTSHAGPISLSIFFSSHYTGDELSPKFGNGEPWKKVFGPVFVYLNSA
PPAEKDLYAALWKDAKAQLAKEVKSWPYSFPASDDFPAADQRGTVTGSLSVRDRYVNRLD
IPGNSAYVGLAPPGEVGSWQRECKGYQFWTKANADGSFSIPNVRAGEYNLFAWVPGFIGD
FKHNIIIKISPGSNQNVGKLVYEPPRDGPTLWEIGVADRSAAEFRVPEPNKNLMNRLYVD
RGDWFRQYGTWEQYSQMYPTTDLVFTIGVNQHQRDWFYAHVPRKLGNKYVPTTWSIVFKI
DQVLPSGTYKLRIAIASATYAELQVRVNDEKAVRPLFTTGNIGKDNAIARHGIHGLYWLY
TVNVPGNLLHPGKNTIFITQTRTSMPFNGFMYDYIRLEGPPTNVA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacacgaaaggaaaaaggtgaaagcgatgaagaactctattgatgcttacgtg
caatatccatattcttggacgaagaagaaaaactcaggtgtggtattatggtggatggca
tttctttccgtcctttcattatctatcacatcggtcgaaagtttggcagcaagaaacttt
ccgtctgtggcaaatgctaacgttaagggatcaaactcaggactcaaattactcgttcaa
ggaaaatatgtagtgatggaaaacagttttgttcgagttaacttatccaaccccgatggt
ctagtaactgctgtacaataccacggcatcgatgctaacttactcgagattcgcgatacc
gaagacagcagagggtactgggatgttgtgtggggagaaccaggacataaagattatttt
gataagttgaaagcaacaacttttaaggttatagtacaaaacgagaaccaaattgaagtt
tctttttcatggaaatgggatatttctttgaaaggcaaactcgctcctatgaatttggac
aaaaggtacatcatgctaaaagattcctctggtttctatacgtatggtatttttgatcac
cctaaaggattcccagagtttagcctcgccgaagccagggttgctttcaagctcagctca
gccatgtttcaccacatgaccgtatcagatacaatgcaaagagagatgcccgcgtatgag
gatcgtcaaaaaggtcaacctttggcctatcctgaagcagttctgttaacaaatccaatc
aatccagttcataaaggagaggtagatgataagtacatgtattcagttgagaacaaagat
actggggtacatggatggattagtgcgaatccacgtgtaggattttggattataacagct
agcagtgagttccttgtaggtggccctcacaaacaggacctcacctcccatgcaggccct
ataagtctctctatattctttagtagccattacactggagatgagctatctcctaaattt
ggaaatggagaaccgtggaaaaaagtttttggtcctgttttcgtgtatcttaactcagcc
cccccagcagaaaaagatctctatgcagcactgtggaaggatgcaaaagctcagttggcc
aaggaagtcaaaagttggccttacagtttccctgcttcggatgactttcctgctgcagat
caacggggtactgttacaggcagcttgtcagttcgggataggtacgttaatcggcttgac
attcccggtaattctgcttatgttggtttggctcccccaggagaagttggatcttggcaa
agagaatgcaagggttatcagttttggactaaagccaacgcggatgggtcattttcgatc
ccaaatgttcgtgccggagaatataatctttttgcttgggttcctggttttattggagat
tttaagcacaacattatcattaagatatccccaggatctaatcagaatgtgggtaagctt
gtttatgaacctccaagagatggtcctacattgtgggagataggagttgcagatcgatca
gcagctgaatttcgagtccctgaacctaataaaaacctcatgaacagactgtatgttgat
cgtggggactggttccgacagtatggaacgtgggagcaatactcacaaatgtatccaact
acagatctcgtcttcacaattggtgttaaccagcaccagagagattggttctatgcacac
gttccaaggaaactaggtaacaagtatgttccaacaacatggagcattgtattcaaaatc
gaccaagtcttgccatccggaacttataaactccgaatagcaattgcctctgctacttac
gctgaattacaggttcgggtcaatgacgagaaagcagtaaggcctctcttcacaactgga
aatattggaaaagacaatgcaattgcaagacatggaatccatggattgtactggttatat
acagttaacgtaccaggaaacctacttcacccaggcaaaaacacaatattcataacacaa
acaagaacttcaatgccattcaatggtttcatgtatgattacattcgcttggaaggacct
ccaaccaatgttgcatag
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