Papaver somniferum (opium poppy): 113310959
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Entry
113310959 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113310959
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113310959
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113310959
NCBI-ProteinID:
XP_026415572
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All DBs
Position
1:196311337..196315511
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AA seq
702 aa
AA seq
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MKKTNYSSMLRSITAILSILLLSITSVESSLAKNIQVNVAANGGMDTTLRHRKARPSSRG
DATTIGGSNSKLQLLVQERHVVLENNIVRVNLSKPEGLITAIQYKDIDGNLLDHGSAEDS
RGYWDVVWGDPGKNGTTDKLRTTTFKVVVQNENQIEVSFTMSWDTSLKGKVMPVNVDKRF
VMLKDSSGFYTYAIFERLKGWPELSIAEARIAFKLSEDKFHHMTITDTRQREMPAYQDRQ
KGQPLAYPEAVLLTDPVNPAHKGEVDDKYQYSTENKDTGVHGWISANPPIGLWMIAASNE
FRAGGPHKQDLTSHAGPISLAMFISNHYTGEDLAPKFENGEPWKKVFGPVFVYVNSAPEA
KKDVFTTLWEDAKAQLAKEIKSWPYSFPASADFPASDQRGTVTGSLLVRDRYVNQRDIAG
KSAYVGLAPPGDVGSWQRECKGYQFWTKANADGSFLIPNVRAGEYNLFAWVPGFIGDFKH
NVIIKISPGSKQSLGKLVYEPPRSGPTLWEIGFPDRSAAEFRVPEPNKKYMNKLYANRED
WFRQYGTWERYSEMYPTRDLVFTIGVSQHQRDWFYAHVPRKLGNKGVPTTWSIVFKINKI
LPSGTYKLRLALASATYAELQVRVNDQKAAKPLFTTGRIGKDNAIARHGIHGLYWLYTVD
VPGNLLRPGQNTIFLTQTRTSSAFYGFMYDYIRLEGPPSNVA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgaactatagttccatgttacggtcgataacagcaattctttccatcctt
ttactgtctattacatccgtcgaaagttcgttagctaagaacattcaagtaaatgttgcc
gcaaatggaggcatggacactacattaaggcatcggaaagctagaccttcatctagggga
gatgctactaccattggtggatctaactctaaactccaattactcgttcaagaacgacac
gtagtgttggagaacaacatagttcgagtaaacttatcgaaacccgagggtctaataact
gcaatacaatacaaggacatcgatggtaacttactcgatcatggatccgcagaagatagc
agagggtactgggatgttgtatggggagacccagggaaaaatgggacgacggacaagttg
aggacaacaacatttaaggttgtagtacaaaatgagaaccaaatcgaagtttcatttacg
atgagttgggatacttctcttaaaggcaaagtcatgcctgttaatgtagataaaaggttt
gttatgctgaaggattcttcgggtttctatacgtacgctatttttgaacgtttgaaaggt
tggcccgagcttagcattgcagaagccaggattgctttcaagctcagcgaagacaagttt
caccacatgaccataacagatacaaggcagagagagatgcctgcgtaccaagatcgtcag
aaaggtcaacctttagcctacccggaagctgttctgttaacagatccagtcaatccagct
cataaaggagaggtagatgataagtaccagtattccactgagaacaaagatactggggta
cacggatggattagtgcaaatccgccaataggattatggatgattgcagcaagtaatgag
ttccgcgcaggtggccctcacaaacaagacctcacctcccatgcaggccctataagtctt
gcaatgtttattagtaatcattacactggagaggatctagcaccgaaattcgaaaatgga
gaaccgtggaaaaaggtttttggcccggtttttgtgtatgttaactcagctcctgaagca
aaaaaggatgtctttacaacactctgggaagatgcgaaagctcagttggcaaaggaaatc
aaaagttggccttacagtttccctgcttcggctgactttccagcctcagatcaaaggggt
actgttactggcagcttgttagtccgggataggtacgttaaccagcgtgacattgctgga
aaatctgcttatgttggtttagctcccccgggagacgttggatcttggcaaagggagtgc
aagggctatcagttttggactaaagccaatgctgatggatcatttttgatcccaaatgtt
cgtgccggagaatataatctttttgcatgggttcctggttttattggagattttaagcac
aacgttatcattaagatatccccaggatctaaacaaagtttgggtaagcttgtgtatgaa
cctccaagatctggtcctacattgtgggagataggctttcccgatcgatctgcagctgaa
ttccgagtacccgaacctaataaaaaatacatgaacaaactgtatgctaatcgcgaagac
tggttccgtcagtatggaacatgggagcgatactcagaaatgtatccaacaagagatcta
gtctttacaattggtgttagccagcaccagagagattggttctacgcgcacgtcccaagg
aaactaggcaacaaaggtgtaccaacaacatggagcattgtgttcaaaatcaacaaaatc
ttaccatctggaacttataaactccgattagcacttgcgtctgctacttatgcagaatta
caggttcgtgtgaatgaccaaaaagcagcaaaacctctcttcacaactggcagaatagga
aaagacaatgcaattgcaagacatggaattcacgggttgtactggttatacacagtcgac
gtaccaggaaatctacttcgcccaggccagaatacaatatttctaacacaaacaagaact
tcaagcgcattttatggcttcatgtatgattatattcggttggaaggtcctccaagcaat
gttgcatag
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