Papaver somniferum (opium poppy): 113311339
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Entry
113311339 CDS
T05758
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113311339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113311339
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113311339
U7-dependent histone pre-mRNA processing factors
113311339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_occluded
RRM_10
F07F6_N
Motif
Other DBs
NCBI-GeneID:
113311339
NCBI-ProteinID:
XP_026415963
LinkDB
All DBs
Position
9:9983457..9984833
Genome browser
AA seq
458 aa
AA seq
DB search
MASSNSKQRCVFVGNIPYDTTEEQLVQICQEVGPVVSFRLVTDRETGRPKGFGFCEYKDE
ETALSARRNLQGYEINGRQLRVDFAESDKSAADRNRSTPSVVDSKKSIGGPGVVEDSGLD
RPIGISLASTAASVMAGALGSFQNGAMSQSGSGSDQLTNYLANMSRNKMFDIMSEFKVMA
TQNKELARQLLLSNPQLPKALFQAQIVLGMVTPQVLQMPNIRQSPGSILQPLPLQAGHLP
SVPQNVLVNNQPSSGTFPQLSMQPRLPHPQQPQPNQHLPQTGMSMQPGALTVPSMRPFSG
FPTRPPSQVLEISPALNQQYQQPPLHLPRPPFSQQNFQPSSSNSIMRPSVHESVNKFAER
STQVTDDARNSTYPSTSSVLLEQKRRMGDASDSINRPSKLARLDDGMQYPEKQAPQQAPD
NESALLEQVMNLTPEQLSSLTLEQRQQVIELQKMLGNR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagcaattctaagcagcgctgtgtttttgttgggaacataccgtatgataca
acggaagaacaacttgtgcaaatctgtcaagaggttggtcctgttgtctctttcagatta
gttactgacagagaaaccgggagacccaaagggtttggtttctgcgagtataaagatgaa
gagactgccttaagtgctcgtcggaatcttcaagggtatgaaattaatggtcgccagtta
cgagttgattttgctgaaagtgataaaagtgctgctgacagaaaccgctctacgccaagt
gttgttgattctaaaaaatcaataggtggtcctggtgtcgttgaggattcaggtcttgat
cggccgattgggatctcgttagcttctacagctgcatctgtcatggcaggagcactgggt
agttttcagaatggtgccatgtcccaatccggttcgggaagcgatcaattgacgaattat
ctagctaatatgtcaagaaacaagatgtttgatattatgtctgaattcaaagtaatggct
acccaaaacaaagagttagcacggcagctattgttatcgaatccgcagctcccaaaagct
ctatttcaggcacagatagtgcttggaatggtgactccacaagtgttgcagatgccaaat
atccgtcaatcacctggttcaatcttgcagccgcttccactacaagcaggccatttacct
tccgtacctcagaatgtccttgttaacaatcagccttcttctgggacgtttcctcagctg
tctatgcaacctcggcttccacatccacaacaaccacaaccaaatcaacatctgccacaa
acaggaatgtcaatgcagcctggagctttaactgttccttccatgaggccgttttctggt
tttcctacaaggccacccagccaggttctggaaatttctcccgcattaaatcagcaatat
caacagcctcctctgcatctgcctcgccctccgttttcacaacaaaattttcagcctagc
tcatcaaattcaattatgcgacctagtgtgcatgaatcagtgaacaaatttgctgaaaga
tcaactcaagttacggatgatgccagaaacagcacgtatccaagcacgtcttccgtacta
ctggagcaaaagcgtaggatgggtgatgcttctgatagtattaatcgtccatcaaagctg
gcaaggttagacgatgggatgcagtatccagaaaagcaagctcctcagcaggcacctgat
aatgagtcagctctacttgaacaagtgatgaacctgacgccagagcagttgagttccttg
accttggagcagaggcaacaagtgattgagctccagaaaatgctcgggaataggtga
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integrated database retrieval system
