Papaver somniferum (opium poppy): 113313113
Help
Entry
113313113 CDS
T05758
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113313113
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113313113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
TPR_19
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
FAT
TPR_9
ANAPC3
Motif
Other DBs
NCBI-GeneID:
113313113
NCBI-ProteinID:
XP_026417618
LinkDB
All DBs
Position
9:complement(203978949..203986723)
Genome browser
AA seq
315 aa
AA seq
DB search
MKESAVGCHMLLFERGLHHVGTDYMSFLLWNEYIKFEESLNKRGRVAVILKKVLAVPIKY
RSFFLKRFAWTRMTLTEAESNKFEKAEKFVQRILRFEEAIWTPYFHLSHPDESELAAWRK
YLDFIETEGDFEKVILLYERCLVACANYPEFWIRYVNFLENGGRRDTAYDALERVTLIYA
KREPYIHLFRARFYEKNLHFSKARAAYQLLHSEILPGHPEALVDHARFELRQGNVKEAFS
LLEKAIPAGIREEQAQKVFHSLIADEYEKSTKRVAESPPSSKAKRAKLEVENGDLRSSVS
DNSSVATENRVLLLN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagtgctgtgggttgtcatatgctgctgttcgaaaggggtcttcatcatgtc
gggaccgattatatgtcgtttcttctatggaatgagtatatcaagttcgaagagtcgctg
aataaaaggggtcgcgttgctgtgattttgaagaaagttctcgcagttccaattaagtat
cgtagtttctttctcaagagattcgcatggactcgaatgacgcttacggaagcagagtcg
aataagtttgagaaagcggaaaaatttgttcaaaggatccttcggtttgaagaagccatt
tggaccccttacttccatttgtcccaccctgatgagtcggagcttgcagcttggcgaaag
tatctagactttatagaaacagaaggtgactttgaaaaggtcattttattatacgaaaga
tgcttagttgcatgcgccaactatcctgagttctggattcggtatgtcaatttcttggaa
aatggaggaaggagggatactgcatatgatgctcttgagcgtgttactctaatctacgca
aagagagagccatatattcatctatttcgcgctagattctatgagaagaatttgcatttc
tcgaaagctcgtgctgcctatcaacttttgcattctgaaatcttgccgggtcatcctgaa
gcactagttgatcatgccagatttgaactccggcagggtaatgtgaaagaggctttttct
ttattagagaaggccattcctgctgggataagggaagagcaggcacaaaaagtgttccat
tctttgattgctgacgagtatgaaaaatcaacaaaaagggtcgccgaatctcctccttcg
agtaaagccaaacgcgccaaattggaagtagagaacggagatttgaggtcatctgtcagt
gataattcttcagttgctactgaaaatcgagttcttttgttgaactag
DBGET
integrated database retrieval system
