| Entry |
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| Name |
(RefSeq) spliceosome-associated protein 130 A-like
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| KO |
| K12830 | splicing factor 3B subunit 3 |
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| Organism |
psom Papaver somniferum (opium poppy)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:psom00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113313196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:psom03021]
113313196
03041 Spliceosome [BR:psom03041]
113313196
03036 Chromosome and associated proteins [BR:psom03036]
113313196
Transcription machinery [BR:psom03021]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113313196
Spliceosome [BR:psom03041]
Complex A
U2 snRNP components
U2 snRNP specific factors
113313196
Complex B
113313196
Complex C
U2 SnRNP specific factors
113313196
Chromosome and associated proteins [BR:psom03036]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113313196
TFTC complex
113313196
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:44882691..44887159
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| AA seq |
1223 aa
MYLYSLTLQKATGVVCATNGNFIGGKSQEMVVARGKVLDLIRPDENGKIQTILSVEVFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVPGQYI
AVDPKGRAVMVAACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIAGVDCGFDNPI
FAAIELDYSEADQDSTGQAATEAQKHLTFYELDLGLNHVSRKWTEPIDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRVDLPPERGVLIVSASMHRQKSMFFFLLQ
TEYGDIFKVTLDHNNDRVTELKIKYFDTIPVTAAMCVLKTGFLFAASEFGNHGLYQFKAI
GDDADVEASSSTLMETDEGFHPVFFQPRGLKNLVRIDQVESLMPMMDMKVSNLFEEETPQ
IFTICGRGPRSSLRILRPGLAVAEMAVSQLPGIPVAVWTVKKNVSDEFDAYIVVSFAQAT
LVLSIGETVEEVSDSGFLDTTASLSVSLLGDDSLMQVHPNGIRHIRDDGRINEWKTPGKR
TIVKVASNRLQVVIALSGGELIYFEMDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSAPESLLLLEVQASVGGEDGADHPASVFL
NAGLQNGVLYRTVVDMVTGQLTDTRSRFLGLRAPKLFSTLVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGTALRIFAIERLGETFNETVIPLRYTP
RKFVIHPKKKLLVIIESDQGALAAEEREAARKECLEDARMGENGNANGNGEQMENGADDE
KEDPLSDEQYGYPKAEAEKWVSCIRVVEPRRILEQETAGTCTTCLLELQDNEAAFSLCTV
NFHDKEYGTLLAVGTAKGLQFWPKKSCTAGFIHICRFMDDGRRLELLHKTQVEGVPLSLC
QFQGRLLAGIGQTLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCK
YRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDLSDEIEEDPTGG
KIKWEQGKLNGAPNKLEEIVQFHIGDNITCMQKASLIPGGGECMIYGTVMGSVGSLLAFT
SREDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPNLPLDLQRKI
ADELDRTPGEILKKLEDVRNKII |
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| NT seq |
3672 nt +upstreamnt +downstreamnt
atgtatctctatagtttaaccttgcaaaaagctactggtgttgtatgtgcaacgaatggg
aacttcattggtggaaaatcacaagagatggtagtagcaagaggtaaagtactagatcta
atacgtcctgatgaaaacggtaagatccaaactattctgtcagttgaagtttttggagct
attcgttcattagctcagtttagattaactggttcacaaaaagattatatcgtagttggt
tctgattctggtcgtattgtaattcttgaatataataaagaaagaaattgttttgataaa
attcatcaagaaacttttgggaaatctggctccagaagaattgtgccaggacagtatata
gctgttgatcctaaaggacgtgctgttatggttgccgcttgtgagaaacaaaagcttgtt
tatgtattgaatagagatactgctgctaggttaaccatatcttcccctttagaagctcac
aagtctcatactattgtgtattccattgctggggttgattgtggttttgataatcctatt
tttgctgcaattgagcttgattattctgaagctgatcaggattctactgggcaagcagcc
accgaagctcagaagcatcttacgttctatgagcttgatttagggcttaatcatgtctcc
agaaaatggactgaaccgattgataatggtgctaatatgcttgttacggttcctggaggt
ggagatggacctagtggtgttcttgtttgtgctgaaaattttgtcatctacaagaaccaa
ggtcaccctgatgtacgagctgtcattccccgacgagttgatttgcctccagagcgcggg
gttctcatagtttctgcctctatgcatagacagaagtccatgttcttctttttgttacaa
actgagtatggagatatatttaaggtgactcttgaccacaataatgatcgagttactgag
ttgaagatcaagtattttgatactatacctgtaacagctgcgatgtgtgttctcaaaaca
gggtttctgtttgctgcctcagaatttgggaaccatgggctgtatcagttcaaggccatt
ggagatgatgctgatgttgaagcttcctcatctacgttgatggaaactgacgaaggtttt
caccctgtctttttccagcctagaggtcttaagaaccttgttagaattgatcaagttgag
agtctgatgcctatgatggacatgaaagtttcaaatctatttgaggaagaaactcctcag
atatttactatttgtggtcggggaccacgttcatctctacgaattttgaggcctggtttg
gctgttgctgagatggctgtgtctcaacttcctggtataccagttgctgtttggacagta
aagaagaatgtgagtgatgagtttgatgcatatattgttgtttcctttgcgcaagcaact
cttgtgctctctattggcgagacagtcgaggaagttagtgatagtgggtttctggataca
actgcttcactttctgtctctttgttaggagatgattctctgatgcaagtccacccaaat
ggtattaggcatataagggatgatggtcgtattaatgagtggaaaactcctgggaagaga
acgattgtgaaagttgcttctaacaggcttcaagtggttatcgctttaagtggaggggag
cttatctattttgagatggacatgacaggtcagttgatggaggtcgaaaagcatgagatg
tctggagatgtggcttgtttggatattgctccagttcccgagggtagacagaggtctcgt
ttccttgcagttggatcctatgacaacacaatccgaattttatccttagaccctgatgac
tgtatgcagattctgagtgtgcaaagtgtgtcttcagcgcctgaatctctcctattacta
gaagttcaggcatctgttggcggggaggacggtgctgatcatccggctagtgtgttcctt
aatgctggattacagaatggggttctttacagaacagtcgttgacatggtgacaggtcag
cttactgataccaggtcccgcttcttaggtctgagagcacctaagctcttctctactcta
gtgaggggcaggcgggcaatgctttgcttgtcaagtaggccttggctgggttatattcac
caaggacatttcttgttgacccctctttcttacgagactctcgagtatgcagcgtcattt
tcatctgatcagtgtgctgaaggtgtggtagctgttgctgggactgcattaaggatcttt
gctattgaaagacttggagaaacttttaatgaaactgttataccattgaggtatacccct
aggaaatttgttattcacccaaagaagaagttgctggtaataattgaaagtgatcaggga
gcacttgctgcagaggagcgtgaagctgcaaggaaggagtgtttggaagatgctaggatg
ggggagaatggaaatgcaaatggaaatggagaacagatggagaatggggctgatgatgaa
aaggaagaccctctttctgatgagcagtatggttatccgaaagcagaggcagaaaagtgg
gtgtcttgtatcagagttgttgagccgaggagaattcttgagcaagaaactgcaggcact
tgcactacatgtcttcttgaacttcaggataatgaggcagcatttagcttatgcacagtc
aattttcatgataaagagtatggaacccttttagctgtcggcacagcaaagggactacaa
ttttggcccaaaaaaagttgtacagcagggtttatccatatctgtaggtttatggatgat
ggaagacggcttgaacttctacacaagacacaagtggaaggtgtgcctctttctttgtgc
cagttccaaggaagattacttgctgggataggacaaaccctcagattgtatgacctagga
aagaagagattgctcaggaaatgtgagaataagctgttccccaacactatcgtctctatc
caaacatatcgtgaccggatttatgtgggtgacatccaagagtcatttcattactgcaag
tatagaagggatgaaaaccagctatacatatttgcagacgatagtgtacccagatggctc
acagcatcataccacatagattttgacaccatggctggtgcagacaagtttgggaacgtg
tactttgtccggttaccacaagatctgtccgatgagatcgaagaagatcctacgggcgga
aagataaagtgggaacaagggaagttgaatggagcccccaacaaactagaggaaattgtt
cagttccatataggtgacaatatcacctgcatgcagaaggcatctctcatacctggaggc
ggcgagtgtatgatttatggtaccgtaatgggaagtgtggggtccttgcttgcgttcacc
tcaagggaagatgttgacttcttctcacacttggagatgcatatgcggcaggaacaccct
cctttatgtggaagagatcacatggcatataggtctgcttatttccctgttaaggatgtg
atcgatggagatctctgcgaacagttcccgaatctgcctctagatttgcagaggaagatt
gcagatgagcttgataggactcctggagaaatattgaagaaactagaagatgttagaaac
aagattatttga |
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