Papaver somniferum (opium poppy): 113313196
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Entry
113313196 CDS
T05758
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113313196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113313196
03041 Spliceosome [BR:
psom03041
]
113313196
03036 Chromosome and associated proteins [BR:
psom03036
]
113313196
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113313196
Spliceosome [BR:
psom03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113313196
Complex B
113313196
Complex C
U2 SnRNP specific factors
113313196
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113313196
TFTC complex
113313196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
Prothymosin
Motif
Other DBs
NCBI-GeneID:
113313196
NCBI-ProteinID:
XP_026417719
LinkDB
All DBs
Position
9:44882691..44887159
Genome browser
AA seq
1223 aa
AA seq
DB search
MYLYSLTLQKATGVVCATNGNFIGGKSQEMVVARGKVLDLIRPDENGKIQTILSVEVFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVPGQYI
AVDPKGRAVMVAACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSIAGVDCGFDNPI
FAAIELDYSEADQDSTGQAATEAQKHLTFYELDLGLNHVSRKWTEPIDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRVDLPPERGVLIVSASMHRQKSMFFFLLQ
TEYGDIFKVTLDHNNDRVTELKIKYFDTIPVTAAMCVLKTGFLFAASEFGNHGLYQFKAI
GDDADVEASSSTLMETDEGFHPVFFQPRGLKNLVRIDQVESLMPMMDMKVSNLFEEETPQ
IFTICGRGPRSSLRILRPGLAVAEMAVSQLPGIPVAVWTVKKNVSDEFDAYIVVSFAQAT
LVLSIGETVEEVSDSGFLDTTASLSVSLLGDDSLMQVHPNGIRHIRDDGRINEWKTPGKR
TIVKVASNRLQVVIALSGGELIYFEMDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSAPESLLLLEVQASVGGEDGADHPASVFL
NAGLQNGVLYRTVVDMVTGQLTDTRSRFLGLRAPKLFSTLVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGTALRIFAIERLGETFNETVIPLRYTP
RKFVIHPKKKLLVIIESDQGALAAEEREAARKECLEDARMGENGNANGNGEQMENGADDE
KEDPLSDEQYGYPKAEAEKWVSCIRVVEPRRILEQETAGTCTTCLLELQDNEAAFSLCTV
NFHDKEYGTLLAVGTAKGLQFWPKKSCTAGFIHICRFMDDGRRLELLHKTQVEGVPLSLC
QFQGRLLAGIGQTLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCK
YRRDENQLYIFADDSVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDLSDEIEEDPTGG
KIKWEQGKLNGAPNKLEEIVQFHIGDNITCMQKASLIPGGGECMIYGTVMGSVGSLLAFT
SREDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPNLPLDLQRKI
ADELDRTPGEILKKLEDVRNKII
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctatagtttaaccttgcaaaaagctactggtgttgtatgtgcaacgaatggg
aacttcattggtggaaaatcacaagagatggtagtagcaagaggtaaagtactagatcta
atacgtcctgatgaaaacggtaagatccaaactattctgtcagttgaagtttttggagct
attcgttcattagctcagtttagattaactggttcacaaaaagattatatcgtagttggt
tctgattctggtcgtattgtaattcttgaatataataaagaaagaaattgttttgataaa
attcatcaagaaacttttgggaaatctggctccagaagaattgtgccaggacagtatata
gctgttgatcctaaaggacgtgctgttatggttgccgcttgtgagaaacaaaagcttgtt
tatgtattgaatagagatactgctgctaggttaaccatatcttcccctttagaagctcac
aagtctcatactattgtgtattccattgctggggttgattgtggttttgataatcctatt
tttgctgcaattgagcttgattattctgaagctgatcaggattctactgggcaagcagcc
accgaagctcagaagcatcttacgttctatgagcttgatttagggcttaatcatgtctcc
agaaaatggactgaaccgattgataatggtgctaatatgcttgttacggttcctggaggt
ggagatggacctagtggtgttcttgtttgtgctgaaaattttgtcatctacaagaaccaa
ggtcaccctgatgtacgagctgtcattccccgacgagttgatttgcctccagagcgcggg
gttctcatagtttctgcctctatgcatagacagaagtccatgttcttctttttgttacaa
actgagtatggagatatatttaaggtgactcttgaccacaataatgatcgagttactgag
ttgaagatcaagtattttgatactatacctgtaacagctgcgatgtgtgttctcaaaaca
gggtttctgtttgctgcctcagaatttgggaaccatgggctgtatcagttcaaggccatt
ggagatgatgctgatgttgaagcttcctcatctacgttgatggaaactgacgaaggtttt
caccctgtctttttccagcctagaggtcttaagaaccttgttagaattgatcaagttgag
agtctgatgcctatgatggacatgaaagtttcaaatctatttgaggaagaaactcctcag
atatttactatttgtggtcggggaccacgttcatctctacgaattttgaggcctggtttg
gctgttgctgagatggctgtgtctcaacttcctggtataccagttgctgtttggacagta
aagaagaatgtgagtgatgagtttgatgcatatattgttgtttcctttgcgcaagcaact
cttgtgctctctattggcgagacagtcgaggaagttagtgatagtgggtttctggataca
actgcttcactttctgtctctttgttaggagatgattctctgatgcaagtccacccaaat
ggtattaggcatataagggatgatggtcgtattaatgagtggaaaactcctgggaagaga
acgattgtgaaagttgcttctaacaggcttcaagtggttatcgctttaagtggaggggag
cttatctattttgagatggacatgacaggtcagttgatggaggtcgaaaagcatgagatg
tctggagatgtggcttgtttggatattgctccagttcccgagggtagacagaggtctcgt
ttccttgcagttggatcctatgacaacacaatccgaattttatccttagaccctgatgac
tgtatgcagattctgagtgtgcaaagtgtgtcttcagcgcctgaatctctcctattacta
gaagttcaggcatctgttggcggggaggacggtgctgatcatccggctagtgtgttcctt
aatgctggattacagaatggggttctttacagaacagtcgttgacatggtgacaggtcag
cttactgataccaggtcccgcttcttaggtctgagagcacctaagctcttctctactcta
gtgaggggcaggcgggcaatgctttgcttgtcaagtaggccttggctgggttatattcac
caaggacatttcttgttgacccctctttcttacgagactctcgagtatgcagcgtcattt
tcatctgatcagtgtgctgaaggtgtggtagctgttgctgggactgcattaaggatcttt
gctattgaaagacttggagaaacttttaatgaaactgttataccattgaggtatacccct
aggaaatttgttattcacccaaagaagaagttgctggtaataattgaaagtgatcaggga
gcacttgctgcagaggagcgtgaagctgcaaggaaggagtgtttggaagatgctaggatg
ggggagaatggaaatgcaaatggaaatggagaacagatggagaatggggctgatgatgaa
aaggaagaccctctttctgatgagcagtatggttatccgaaagcagaggcagaaaagtgg
gtgtcttgtatcagagttgttgagccgaggagaattcttgagcaagaaactgcaggcact
tgcactacatgtcttcttgaacttcaggataatgaggcagcatttagcttatgcacagtc
aattttcatgataaagagtatggaacccttttagctgtcggcacagcaaagggactacaa
ttttggcccaaaaaaagttgtacagcagggtttatccatatctgtaggtttatggatgat
ggaagacggcttgaacttctacacaagacacaagtggaaggtgtgcctctttctttgtgc
cagttccaaggaagattacttgctgggataggacaaaccctcagattgtatgacctagga
aagaagagattgctcaggaaatgtgagaataagctgttccccaacactatcgtctctatc
caaacatatcgtgaccggatttatgtgggtgacatccaagagtcatttcattactgcaag
tatagaagggatgaaaaccagctatacatatttgcagacgatagtgtacccagatggctc
acagcatcataccacatagattttgacaccatggctggtgcagacaagtttgggaacgtg
tactttgtccggttaccacaagatctgtccgatgagatcgaagaagatcctacgggcgga
aagataaagtgggaacaagggaagttgaatggagcccccaacaaactagaggaaattgtt
cagttccatataggtgacaatatcacctgcatgcagaaggcatctctcatacctggaggc
ggcgagtgtatgatttatggtaccgtaatgggaagtgtggggtccttgcttgcgttcacc
tcaagggaagatgttgacttcttctcacacttggagatgcatatgcggcaggaacaccct
cctttatgtggaagagatcacatggcatataggtctgcttatttccctgttaaggatgtg
atcgatggagatctctgcgaacagttcccgaatctgcctctagatttgcagaggaagatt
gcagatgagcttgataggactcctggagaaatattgaagaaactagaagatgttagaaac
aagattatttga
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integrated database retrieval system
