KEGG   Papaver somniferum (opium poppy): 113313419
Entry
113313419         CDS       T05758                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psom03400]
    113313419
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113313419
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 Prok-RING_4 DEAD zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 UBA_Rad5
Other DBs
NCBI-GeneID: 113313419
NCBI-ProteinID: XP_026417971
LinkDB
Position
9:159015779..159023045
AA seq 1043 aa
MGNSKVTEELMMTVRSVIGEGFSDMDIIRALHMAKNDVTAAINIIFDVPDFSNNKDRVEN
GRNRVENGKNPETSIRSLNEEIRTTNVVVKPNLLETDVIGNPNLFPESNNVRDSQVGEKL
KFGDGSEWWLIGSTELAGLSTCKGRKLKVGEEVEFSFPFKKSNSPSSSSTSKGKQTASAC
SEIVRFSTKDSGEIGRIPNEWGRCLFPLVKDKKVRIEGRCKFAPGVLAIMDSILLSVSVY
INSSMFRKCHQTSLKATRTSAEESVVHPLPNLFRLLGLTPFKKAELTPEDLYSRKRPLNL
KDSSGSQTSILNNDKSKKPSPQASEDENEHVAVSDSDLDNIVGTGDSSQLEEIDPPTTLQ
CNLRSYQKQALCWMIQLEKEGCVEKASTTLHPCWDAYRLAHKRELVVYLNSFSGDATTEF
PSTLQMSRGGILADAMGLGKTIMTIALLLAHPGRGGLSNGHLTVQDSSETNESSLSDQSP
SSTQKVKRFSGFDKLMKPKESLVSGGSLIVCPMTLLGQWKAEIETHSKSGSLSIYVHYGQ
SRPKDAKLLAQNAVVLTTYGVLASEFSAEGEENGGLYSVRWFRIVLDEAHTIKSSKSQVS
VSAAALTADCRWCLTGTPIQNNLEDIYSLLRFLRVEPWGNWGIWNKLVQKPYEEGDERGL
KLVQSILRPIMLRRTKSSTDREGKPILVLPPADVQVIYCELTAAEKDFYDALFKRSKVKF
DQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLRGGQDAV
QGESPDAPSRAYIQEVVEELRKGDKGECPICLEAFEDAVLTPCAHRLCRECLLASWRNHT
SGLCPVCRKTVNKQDLITAPTDSRFQIDIEKNWVESSKVVILLRELENLRASGSKSIVFS
QWTSFLDLLQIPLSRSNISFVRLDGTLSQQQREKVIKQFSEENDIMVLLMSLKAGGVGIN
VTAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKNVTIRRFIVKGTVEERMEAVQARKQRM
ISGALTDQEVRTARIEELKMLFT
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgggaaacagcaaggttacagaagaattaatgatgacagtaagatctgttatcggtgaa
ggtttttcagacatggatattatccgggctcttcatatggcaaagaatgatgtaacggct
gcgattaatataatctttgatgtgcctgattttagtaacaacaaagatagagtagagaac
gggaggaatagagtagagaatgggaagaatcctgaaacatcgattcgcagtttaaatgag
gagattagaactactaatgttgtggtgaaacctaatttgttagaaactgatgtgattggg
aaccctaatttgtttcctgagagcaataatgtcagggattctcaagtaggtgagaaattg
aagttcggtgatggaagtgaatggtggttaattggtagtactgaacttgctgggttatct
acatgtaaaggaagaaaactcaaagtaggggaagaagtagagttttcttttcctttcaag
aaatcgaattccccttcctcctcttccacaagtaaaggaaaacaaacagcgtctgcttgc
tctgagattgtaaggttttcaacaaaagattcaggagagattggccgcattccgaatgaa
tggggccgttgtctctttccattagtgaaagataagaaggttcggatcgagggacgctgt
aaatttgctccgggtgttcttgccatcatggactctattcttttgtcagtcagtgtgtac
atcaacagttcaatgttccgtaagtgccaccagacttcactcaaggcaacccgcacttct
gcggaggaatcagttgttcatcctcttccaaatttgtttaggttgcttgggttaacccct
tttaaaaaggcagagctcactcccgaggatctttattctagaaagcgaccattaaacttg
aaggatagttctggatcacaaacatcaatattaaacaatgacaaatctaagaagccatct
ccccaagcaagtgaagatgaaaatgagcatgtagctgtttcagattcagatttggataat
atcgttgggacaggggacagctctcagctagaggaaatagatcccccaactacccttcag
tgcaatctgcggtcctaccagaaacaagctctttgttggatgatccagctggaaaaggaa
ggatgtgtggagaaggcctctaccaccctccacccatgttgggatgcttatcgtcttgca
cacaagagggagcttgttgtctatttgaattcgttttcaggtgatgctacaacagaattt
cccagcactctacaaatgtcaagaggaggtatcttggcagatgctatgggtcttgggaag
accattatgactatagcactgcttcttgcacacccagggagaggtggattatcaaatggt
cacctcacggtccaagattctagtgaaactaatgaaagcagtttgtcagatcaatctcca
agttctacacagaaagttaaaaggttctctggttttgataaactcatgaaacccaaggaa
tcccttgttagtggtgggagtttgattgtttgccccatgacccttctagggcagtggaag
gcagaaatcgagactcatagcaaatctggatctttgtctatttatgttcattatggacaa
agtagaccaaaagatgcaaagctactggcgcagaatgctgttgttcttactacttacggc
gtattagcttcagagttttcagccgagggtgaagaaaatggtggattatattcagtacgg
tggttcagaattgtgcttgatgaagctcatacgataaaatcttctaagagccaagtttct
gtttcagcagctgctttaactgctgattgtcggtggtgtcttactggaacccctatccag
aataacttggaggatatctacagccttcttcggtttttgagggtagagccgtggggtaac
tggggaatatggaacaaattggttcaaaagccctatgaggagggtgatgaacgaggattg
aagttggtccaatccattctaagaccaatcatgttgagaagaacaaagtccagcacagac
agagagggaaagccgattcttgttctccctccagcagatgttcaggtgatctactgtgaa
ctcacagcagctgaaaaagatttttatgatgctttgtttaaaagatcaaaggtgaagttt
gaccagtttgttgagcaagggcgggttctgcataattatgcatccattttggagttgctt
ttgcgtcttcgacaatgttgtgaccatccgtttcttgtgatgagccgcggtgatactcaa
gaatactcagatctaaataagctcgccaagcgtttcctgagaggaggtcaggatgcagta
caaggggaatctcctgatgcaccgtcaagggcttatatccaggaggtggtggaagagcta
cgcaagggagacaaaggagagtgtccaatatgccttgaagcttttgaagatgctgtgttg
acaccttgtgctcatcgattgtgtcgggaatgtcttttggccagttggcgaaaccatact
tctggcctttgtcctgtttgtaggaagaccgttaacaagcaagatcttatcacagctcca
accgatagtcgcttccagatcgatattgagaaaaattgggtggaatcgtcgaaagtagtg
attcttttgcgtgaattggaaaatctgcgtgcatctgggtccaaaagtattgtttttagt
cagtggacttccttcttggaccttctgcagattcctctttctaggagtaatatttctttt
gttcgtttggacgggaccctaagtcagcaacagcgagagaaagtaataaagcagttttca
gaggaaaatgatataatggtattgctgatgtctttgaaggctggtggagttggaataaac
gtaacagcagcctcaaatgcgttcgttttggatccttggtggaatcctgcagtcgaggaa
caagctgtcatgcgaattcatcgtataggtcagaccaaaaatgtaaccatcagacggttc
attgtgaagggaacggttgaggaaagaatggaagcagtacaggcgcgtaaacagcgtatg
atatctggtgctttaactgatcaggaagtccgcactgctcgtatagaggaactgaaaatg
cttttcacctga

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