Papaver somniferum (opium poppy): 113313424
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Entry
113313424 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113313424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113313424
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113313424
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
HECT type E3
113313424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
113313424
NCBI-ProteinID:
XP_026417976
LinkDB
All DBs
Position
9:complement(29392330..29400418)
Genome browser
AA seq
1542 aa
AA seq
DB search
MFLSSWNKKKIKFYGLIKKKKASKLMENLGKRRTESTDQLQSPVDKKACSSSEESENPES
SSSLQTHMGSTTSNQQQFVDEDTVMEDAETEVESTAPATTSAATSVSGRSEDEEEEDDYS
DGGGGNDELTEKERVYQEHSDRRNPSDQEKFTMVLKSLSDENTDVSGQLSSLTELCDVLS
FCTESSISGSTAAALSPLLVKLARHESNPDIMLYSIRAITYLVDVLPGISVLLARVDAVP
ALCERLMAIEYMDVAEQCLLALEKISADQPVACLQAGAIMAVLSFIDFFSSSLQRVATST
VANVCKKLSSDASSHFMDAVPALCNLLQYEDPKLVANVVTCLSRITETVSNSPIMVDQLC
EHRLIQSVIPLIAMGSQTSFNQSIYSHLIGILSRLASGSANAVKILLEQKISCILKNILS
SYDVSHSKASSLGDGDAKSNQVFEVLKLLNVLLPPVGGEKSSSKEKVLKDQPELLRRFGM
DIVPTLVEVVNNGANLQVCDGCVSVINKLVNVSRSDILFDILDNSNISSFLAGVFARKDH
HVLISALNIVQTILKELPDMFLNSFAKVGVVYAIDAILTLEKLTNSSNNQISSSSQQKSN
VNDSVRCLCYNLNIGKPRSSEIGKCKLEKDSIHTLAKQIKETYFAVESQTSEIGLTETLQ
NLRKYSATLNDMVNLSMSNNIWSGLEENLFHTLGQIVMELSDGDSVSTFEFIESGIVKSL
LNYFSNGQYLKGKVVEHHGLSDYSLVIMKRFATFASFSLSSTSVRWEGTPLAVLVRKLQA
ALSSLENFPVILNQISKPRAVHAAIPTKHATTHPCLRVRFVKEEGETDFCDDSLDTVNIE
PFTSFDAIERYLWPQISARRNDAQTTSAVNTSGESEDDSRKTGTPKRQKSVDESSSSAFS
GKEHHESRGIDDCHQLLKFFLDGRELDLRLTLYQAIFQLQVKDENDMIAGKNFWSKVFNI
TFKRAAEVMESSTDDCLEGTQVSIMQNYPGKFYQNLLSLSGMLTVELLYNLEKSDPVYEI
LLLLKILEVINKSTGHLMSHERIKAFAEGKSDDLDSLAVSVCPVPQSEFVSSKLTEKLEQ
QMVNPSAVSAGAMPAWCSQLMAECPFLFSFEARNKYFLLTVIRSPLVLSHSSSTSSSNNS
SPGSDRRSLVGNFPRKKYRIPRTHILHSAAQMMDAQADKVTLEVEYSEEVGTGLGPTLEF
YTLVSHEFQKLGLGMWREDRSFPSSGKKVEPGCVVAPSGLFPRPWSTTMELSNGVKFSEV
LKRFVLLGKIVAKALQDGRVLDLPLSKAFYKLVLDQDLNIHDILSLDPGLGRVLLEFQAL
VDRKRILSPISAFYFRNTKIDDLCLDFTLPGYPDYLLTSSQDQRMVNTANLEEYVSLIVD
ATLNSGISRQGEAFKSGFNQVFPLTSLKVFTGEEIDRLLCGEQDAWTSNELLDHIKFDHG
YTVSSPQIIYLLEIMKDLQRDQQQAFIKFVTGAPRLPHGGLAALNPKMTIVRKHSNEWAD
GDLPSVMTCANYLKLPPYSTKDIMKEKLLYAITEGQGSFHLS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctcttcctggaacaaaaaaaaaatcaagttttatggtttgattaagaagaag
aaagcgagtaagttgatggagaatttgggaaaaagaagaactgaatcgactgatcagtta
caatctccggttgataaaaaggcgtgtagttcttcagaagaatcggagaatcctgaatct
tcgtcgtcgttacaaacacatatgggttcaacaactagtaatcaacagcaatttgtggat
gaggatactgtgatggaggatgcggaaacggaagtggaatcgacagcaccggcgacgaca
tcagcagcgacatcggtttctggtagatcagaagatgaggaggaggaggatgattattct
gatggtggtggtgggaatgatgaattgactgaaaaagagagggtttatcaggaacatagt
gatagaagaaatcctagtgatcaagagaaatttactatggttttgaagagtttgagtgat
gagaatactgatgtgtctggacaattgtcatcacttactgaattatgtgatgtgttatcg
ttttgtacagagagttcgatttctgggagtacggcagctgcgttgtcgccccttttggtt
aagttagctaggcatgaaagtaatccagacattatgttgtattcaattagggcaattact
tatttggttgatgttttgccggggatatctgtattacttgctagagttgatgctgttcct
gcactttgtgagagattaatggctattgagtacatggatgttgctgaacagtgtttgtta
gcattagagaagatttcggcggatcaacctgttgcgtgtttgcaagctggtgcgattatg
gctgttcttagttttatagatttcttctcttcgagtctccagagggttgcaaccagtact
gttgctaatgtctgcaagaaactctcgtccgacgcttcgtcacatttcatggatgccgtt
cctgctttgtgcaatcttcttcagtatgaagacccaaagcttgttgcgaacgtagttact
tgtttatctagaataacggagaccgtcagcaattctcctattatggtggatcaactttgc
gagcatcgattgattcagtcagtaatacctcttatagctatgggtagtcaaaccagcttc
aaccagtcaatctatagtcatctgattgggattctttctagacttgcatctggttccgct
aatgctgtcaagatacttcttgaacaaaaaataagctgcatattgaagaatattttatca
agttatgacgtctcacacagcaaagcctcttcccttggggatggtgatgcaaagtccaac
caggtatttgaagttttgaagttgcttaatgtgcttcttcctcctgtcgggggcgaaaag
tcgtcaagtaaggaaaaggttttaaaggaccaacctgaacttctgaggcgttttggtatg
gacattgttcccactttggttgaggttgtaaataatggtgcaaatctacaagtttgtgac
ggctgtgtttctgtaatcaacaagttagtcaatgttagcagatctgatattctcttcgac
atactggataatagcaacatatcgagttttctcgcgggtgtgttcgctaggaaggatcac
catgtgctgatatcagctttaaatatcgtgcagactatccttaaagagcttccggatatg
ttcttgaactcttttgcaaaggtgggtgttgtttacgccatagatgcaattctaacacta
gaaaagcttacaaactccagtaacaatcagatctcatctagctcacagcaaaaatcaaat
gtgaacgatagtgttagatgcttatgttacaatcttaacataggtaagcctcgatcttca
gaaataggaaagtgcaagcttgagaaagattccattcacactttggcgaagcagatcaag
gaaacttactttgctgttgaatcacaaacttctgagataggattgaccgaaactcttcag
aatcttagaaagtactctgcaacactaaatgatatggtgaatctgtccatgagtaacaat
atttggtctggtttggaagagaacttgtttcacaccctgggtcaaatagtgatggagctt
agtgatggtgattctgtgtcaacatttgagtttattgaaagtggaatagtgaaatcttta
ttaaattatttttccaatggccagtacttgaaaggaaaagttgtagagcatcacgggtta
tcagattattcacttgttataatgaagaggtttgcaacttttgctagtttctctttgtca
tcaacgagcgtacgttgggagggaacgcctctagcagtccttgtaaggaaactgcaagct
gcattgtcttctttggagaacttcccggttattctaaatcagatttcaaaaccaagggct
gtgcatgctgctattccaactaagcacgccaccacacatccgtgtttaagggttcggttc
gtgaaggaagagggagaaacagatttttgtgatgattctttagatactgtgaatattgag
ccttttacctcttttgatgccattgaaagatatttgtggccccagatcagtgccaggaga
aatgacgctcaaacaacatctgctgtaaatacttctggcgaatcagaagatgattccaga
aagacaggtacccctaaaaggcagaagtcggttgatgagagttcctccagcgcattttcc
ggtaaagaacatcatgaatcacgtggtattgacgattgccatcagctgctgaaatttttc
ttagacggaagagagctagatttgagattgaccctttatcaagcaatttttcagttacaa
gtgaaggatgaaaatgatatgatcgcaggcaaaaacttttggtccaaagtatttaatatt
acatttaaaagggctgctgaagtaatggaaagtagtactgacgattgtcttgaaggaact
caggtttctattatgcaaaattatccagggaagttttaccagaatttgctatctctctct
ggtatgctgacagttgaacttctgtataatttagagaagtcagatccagtttacgagata
cttcttcttctgaaaattttggaagttataaacaagtcaactggtcacctgatgtctcat
gaaaggatcaaagcttttgcagaagggaaaagtgatgacttggacagtttagcggtatca
gtctgtccagttccgcagagcgagttcgtgagcagtaaattgactgaaaagttggaacag
cagatggtaaacccttcggctgtatctgctggggcaatgccagcatggtgcagccaacta
atggctgagtgccccttcctatttagttttgaagcaaggaacaaatacttcttattgaca
gtaattcgttctccactagttctatcacattcctcttcaacatcttctagtaataactca
agtcctggcagtgataggcgctcacttgttggtaactttcctcggaaaaaatatcgaatt
ccccggacccacatcctacactctgctgcacaaatgatggatgctcaggccgacaaggtt
acacttgaagtggaatacagtgaagaggttggtaccggactgggtccaactctggaattt
tatacattggtaagtcacgaatttcagaagctaggcttgggtatgtggagggaagatcgc
agtttccccagttcagggaaaaaggtagaacctggatgtgtagttgctccttctggactt
ttccctcgcccttggtcaactacgatggaattgtcaaatggggttaagttttctgaggtg
ttgaagaggtttgtccttctcggaaagattgtagccaaggcactgcaggatggaagagtt
ctggaccttcccttatctaaagctttttataagcttgttctggatcaggatctcaacata
catgatatcctgtcacttgatcctgggcttggaagggttctgctagagtttcaggctctt
gttgataggaagagaattttgagccctatatctgccttctattttaggaatacaaagatt
gatgatctttgtttagattttactctacctgggtatccagattacctgcttacgtccagc
caagatcagagaatggtaaacacagccaacttggaagaatacgtttcactgatcgtggat
gccactttgaattctggaatttcgaggcaaggagaagcttttaaatcgggatttaatcag
gtgtttccgttaacaagtctcaaagtatttactggggaggagatcgatcgtttattatgt
ggagaacaagatgcttggacttcgaatgagcttttggatcacatcaaatttgatcatggc
tacacagttagcagtcctcagatcatttatttgttggaaattatgaaggacttgcagcgt
gatcaacagcaagctttcattaaatttgtaactggagcacctcgacttccacatggaggc
ttagcagctttaaaccctaagatgacaattgtccgcaagcattcaaatgaatgggctgat
ggggacttgcccagtgtgatgacttgtgccaactatctcaaacttcctccttattctacc
aaggatataatgaaggagaagttgctttatgctataactgaaggacagggatctttccac
ttgtcttag
DBGET
integrated database retrieval system
