KEGG   Papaver somniferum (opium poppy): 113313646
Entry
113313646         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113313646
  09124 Replication and repair
   03420 Nucleotide excision repair
    113313646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113313646
   03019 Messenger RNA biogenesis [BR:psom03019]
    113313646
   03400 DNA repair and recombination proteins [BR:psom03400]
    113313646
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113313646
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113313646
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113313646
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 113313646
NCBI-ProteinID: XP_026418227
LinkDB
Position
1:205721342..205725250
AA seq 177 aa
MFFHIVLERNMQLHPRHFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAAVTIVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDIPNYTTSDGSVKIQRDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacatagtgctggaaagaaatatgcaactccatcctcgccatttcggccca
aatctacgtgataagttggttgcaaagctcatgaaagatgtggaaggcacctgcagtggc
cgtcatgggtttgtggtggcaataacaggcgttgataatgttgggaaaggtctaattcgt
gatggtacagggtttgtgacgtttcctgtcaagtatcaatgtgtagttttcagacctttt
aaaggggagatacttgaagctgcggttaccatagttaataagatggggttttttgctgaa
gctggtcctgttcaaatatttgtctcaaaccatctgataccagatgatatggaattccag
tctggagatattccaaattatacaacttcagatggatcagttaaaattcaaagggatagt
gaagtacggctaaagataattggaactcgagttgatgctacagaaattttttgcattggt
accataaaagacgatttcttgggtgtaattaatgaccctggagccgctgcttaa

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