Papaver somniferum (opium poppy): 113313801
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Entry
113313801 CDS
T05758
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113313801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113313801
03021 Transcription machinery [BR:
psom03021
]
113313801
Transcription factors [BR:
psom03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
113313801
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113313801
RNA polymerase III system
TFIIIB
113313801
RNA polymerase I system
SL1/TIF-1B
113313801
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
113313801
NCBI-ProteinID:
XP_026418368
LinkDB
All DBs
Position
9:126678988..126679938
Genome browser
AA seq
200 aa
AA seq
DB search
MADQDMELIDANNHPSGIVPMIQNIVSTVNLDCKLNLKEIAMKARNAEYNPKRFSAVTIR
LKYPKTTGLIFESGKIVCTGAKTEAESKLAARKYARMVQKLGFPAKFKNFKIQNIVTSCD
VNFLVKLDAFQFSNGGRFSNDPQVFPNRMVFKMKQPEITILIFVSGKIVITGAKERGDAY
NAFEHIYPLLTQCKKVVHKM
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagatatggaattgattgatgctaacaatcatccttctggaattgttcct
atgatacagaacatcgtgtcgactgtcaacttggattgcaaattgaatcttaaagaaata
gcaatgaaagcacgtaatgcagagtataatcccaaacgtttttcagcagttactataaga
ttgaaataccccaagacaactgggctgattttcgaaagtggaaaaattgtttgtactggt
gccaaaactgaagcagaatcaaaattagcagcaagaaagtatgctcgcatggtgcagaaa
cttgggtttcctgcgaaattcaagaacttcaagattcagaacattgttacttcctgcgat
gtcaactttcttgttaagctcgacgcctttcaattttctaatggtggcagattttccaac
gatcctcaagttttccctaatcgtatggtgttcaagatgaaacagccagagattacaata
cttatctttgtttcaggaaaaatagttattacaggggctaaggaaagaggtgatgcatat
aatgcatttgagcatatatacccacttcttacacagtgcaaaaaagtggttcacaagatg
tag
DBGET
integrated database retrieval system