KEGG   Papaver somniferum (opium poppy): 113313884
Entry
113313884         CDS       T05758                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psom04121]
    113313884
   03400 DNA repair and recombination proteins [BR:psom03400]
    113313884
Enzymes [BR:psom01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113313884
Ubiquitin system [BR:psom04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113313884
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113313884
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 ResIII DEAD Prok-RING_4 zf-rbx1 SAT HDA2-3 Rad50_zn_hook zf-RING_UBOX zf-ANAPC11
Other DBs
NCBI-GeneID: 113313884
NCBI-ProteinID: XP_026418449
LinkDB
Position
9:92980040..92985152
AA seq 860 aa
MMAASSSTQEETYLLGFVTVNIVGLQHYFASIKDRQVVGLLPEPFNSYDENAIKVLDVKK
TQTQVGYIERSAAAILSPLIDTRQILVQGIVPKTLGVNNRYKKPCQVHIFAKIEDFETVK
SVIMESGLQLISGSNPAFTQSESAIVKELQPKKKFKKIDEVFNFVSDSEKEKGVRWEALE
PPKEIIKTELLDHQKLGLGWLVHRENSDELPPFWIEKEGDYGNLLTDFHTRERPAPLRGG
IFADDMGLGKTLTLLSLIATNRPDNTSNGSLDKLGEDGEQEEQWSVLVSGNESKKRKQIL
KTVDSNKKRRTNTDLEDGNCGVLGPRTTLVVCPPSVFSTWVTQLNEHTRPGHLKVYMYYG
TRTNDPEELQKYDIVLTTYGTLASEFKNSESPVKKVSESPIKKVSESPISKVEWFRVILD
EAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVKSYWQTL
VQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERDKYDQML
MDYQNVVRNYIHRDNVVLNYSRLLSIVLRLRQICNDVTLCPTEELLPSYNIEDVSSNPEL
LQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKNCILKAIQKNSCCPLCRHSLSES
DLFSAPPEESSEDCENSDSSNGSNTYSSKVSALLKLLIASRKENPSRKSVVFSQFRKMLV
LLERPLKDAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASGTGINLTAAS
RVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSGKKNLGSQGS
RKNKDTRQMGGEDIRLLLDL
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgatggctgcttcttcttcaactcaagaggagacatacttgttagggtttgtgactgtt
aacatagttggtctacaacactattttgcttccattaaagaccgtcaagtggtaggttta
cttccagaacctttcaattcttatgatgaaaacgcaattaaagttctagatgttaagaaa
actcaaactcaagttggatacattgagcgttctgctgctgctattttatctcctctaatc
gatactcgccaaattcttgtacaaggtattgtacctaaaaccctaggtgttaacaatcga
tataaaaagccttgtcaggtacatatttttgcaaagattgaggatttcgaaactgttaaa
tctgtgataatggaatctgggttgcagttgatttctggttctaatccagcatttactcaa
tcagaatctgctattgttaaagaacttcaaccaaagaaaaagtttaaaaagattgatgaa
gtttttaattttgtgtctgattctgagaaagaaaagggtgtacgatgggaagccttggaa
ccacctaaggaaatcatcaagactgagttgttagatcatcaaaagttagggttaggttgg
ttggttcatagggagaattctgatgaattgccacctttttggattgagaaagaaggagat
tatgggaatttgttgacggattttcatacaagagaacggcctgcacctttaagaggtggg
atttttgctgatgacatgggtttggggaagacacttactttactatctttaattgctact
aacagaccagacaacacaagtaacggtagtttggataaattgggagaagacggagaacag
gaagaacaatggtctgttttagtgagtggaaatgagtctaagaagagaaagcagatactg
aaaactgttgactcgaataagaaacgtagaacaaacactgatttggaggatggaaattgt
ggcgttttggggccaaggacgacgttggttgtttgccccccatcggttttttcgacgtgg
gtaacacaactaaatgaacatacaagacctggtcatttgaaggtgtacatgtattatgga
acacgaacaaatgaccccgaggagcttcagaagtatgatattgttttgacaacttacggt
actctcgcctctgagtttaaaaatagcgaatcacctgtcaaaaaggttagcgaatctcct
atcaaaaaggtcagcgaatctcctatcagtaaggtcgagtggttccgagttattttggat
gaggcacatgttattaagaatgagaaatcttcccaagctgtagctgttctttctttgaaa
gccttgaggaggtgggtagttacaggaacacctattctgaatggcgcatatgatttgtat
tctctcgtggccttcttgaagtttgagccattgtcagttaagagttattggcaaaccctg
gtgcaacaaccacttgataaaggacaatcgattgggctctcacgtctacagaatatcatg
gcaagcctctctttgcgaagacataaggacgatggtttggtcgaactgccacctaaaact
gttgaaacttgtttggtggagctctctgttgaagaaagggacaagtatgaccaaatgcta
atggattatcaaaatgtggtacgcaactatatccatcgtgacaatgttgtgctcaattac
tcaagattacttagtattgttttgaggctacgtcagatctgtaacgatgtaaccttgtgt
ccaacagaagaattacttccgtcatacaacattgaagatgtatccagtaatcctgaattg
cttcagaagttggtgtcaattctacaagatggagatgactttgactgtccaatttgcatt
tctccaccaactggtaccatcatcacatgttgtgctcatatcttttgcaaaaactgtatt
ttaaaagccatccagaagaattcttgctgccctttgtgccgtcacagtctttccgagtca
gacctcttctctgccccaccagaagaatcttccgaggactgtgaaaatagtgattcttca
aatggaagtaatacctactcctctaaagtttcagcactgttaaaacttctgatagcctct
aggaaggaaaatccatcaagaaaatcagtcgtgttttcacaatttagaaagatgttggtc
ttactcgaacgaccgctaaaggatgctggttttaagattttgagattagatggatcaatg
accgcaacaaggaggggtaaggtgatcaaagaattcgaaaatcaggggtcagattcagct
actgtgcttctagcaagtcttaaagcttcaggaactgggataaatcttacggctgcgtct
agggtatacttgtttgagccatggtggaaccctgcagttgaagaacaggccatggaccgt
gttcaccgaataggacaaaaggaagatgtcaagattgtgaggctaatagttgagaacagc
attgaggaaaggatattggagttacagtcggggaaaaagaatttaggaagtcaaggttct
agaaagaataaggatacgagacaaatgggtggtgaagatattcgcctcttattggatttg
tga

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