Papaver somniferum (opium poppy): 113314393
Help
Entry
113314393 CDS
T05758
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113314393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113314393
03016 Transfer RNA biogenesis [BR:
psom03016
]
113314393
03012 Translation factors [BR:
psom03012
]
113314393
04131 Membrane trafficking [BR:
psom04131
]
113314393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113314393
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113314393
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113314393
Translation factors [BR:
psom03012
]
Eukaryotic type
Elongation factors
113314393
Membrane trafficking [BR:
psom04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113314393
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113314393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
FlpD
GTP_EFTU_D4
FcpA
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
113314393
NCBI-ProteinID:
XP_026418976
LinkDB
All DBs
Position
9:39570366..39573145
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDNISEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEIQTKIDRRSGKELEKEPKFLKNGDAGIIKMIPTKPMVVETFAQYPPLGRFAVRDMRQT
VAVGVIKGVEKKDPTGAKVTKSAVKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaaggttcacatcaatattgttgtcattggacatgtcgactctggtaaa
tcgaccaccactggtcacttgatctacaagcttggaggtattgacaagcgtgttattgaa
agattcgagaaggaggctgctgagatgaacaagaggtcattcaagtacgcttgggttctt
gacaagcttaaggctgaacgtgagcgtggtattaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcacagttattgatgctcctggacatcgtgactttatcaaa
aacatgatcactggtacttctcaggctgattgtgccgtcctcattatcgattctaccact
ggaggttttgaggctggtatctcaaaggatggtcagactcgtgagcacgctcttcttgct
ttcacccttggtgtcaagcagatgatctgttgttgtaacaagatggatgccaccaccccc
aagtactcaaaggccaggtacgatgaaattgtgaaggaggtctcatcttacttgaagaag
gttggatacaacccagaaaaaattgccttcgttcctatctctggattcgagggagataac
atgattgaaaggtccaccaaccttgactggtacaagggaccaactctccttgaggctctt
gacaacatctctgagccaaagagaccatcagacaagccccttcgtcttccccttcaggat
gtttacaagattggaggtattggaactgtgccagtgggacgtgttgaaactggagtcatc
aagcctggtatggttgttacttttggacccaccggtttgaccactgaagttaagtctgtg
gagatgcaccacgaagcccttctagaagctcttccaggagacaatgttgggttcaatgtc
aagaatgttgcagtgaaggatctcaagcgtggtttcgtcgcctccaactccaaggacgat
cctgccagggaagctgccaacttcacctcccaggtcatcatcatgaaccatcctggtcag
atcggtaatggttatgctccagttcttgactgtcacacatctcacattgctgttaagttt
gctgagatccaaaccaagatagataggcgatctggaaaggagcttgagaaggagcccaag
ttcttgaagaacggtgatgctggtattattaagatgattccaaccaagcccatggttgta
gaaaccttcgctcagtacccacctcttggacgttttgctgttagggacatgaggcagaca
gttgctgttggtgtcatcaagggagttgagaagaaggatccaacaggagccaaggttacc
aagtctgctgtcaagaagaagtaa
DBGET
integrated database retrieval system