Papaver somniferum (opium poppy): 113314398
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Entry
113314398 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113314398
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113314398
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113314398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
WDR55
zf-C3HC4
zf-rbx1
zf-RING_11
zf-C3HC4_4
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
zf-RING_5
Phage_scaffold
zf-C3HC4_3
zf_RING_Vps8
CSN5_C
zf-C3HC4_2
Beta-prop_EML_2
zf-RING_16
HTH_Tnp_IS630
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
113314398
NCBI-ProteinID:
XP_026418980
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Position
9:complement(62837025..62842808)
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AA seq
606 aa
AA seq
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MDPDYAPFVDGLVVEGTESEGDESETESGSGASETEEEEEEEEEEEEGEGEPEVVVPAVP
SEVVNVEDSEENCGKKEGETCKASTKESHGDLGSEIDGVCCGICMEPWSSEGNHQVSCLP
CGHVYGLACIKKWIQQSRRGPSKCPQCGSKCTVKNIIKLYVSRLVVTDGAQEQKLHSLKA
ENDFLKMQIADLKEKIKQDKEAWNKERVKRQRVENTSLGDAGIRSVRCNSEQMLNGRNLG
LNPATGQGYPPCRFKLMDELAVDGGKVFDMDFSHDILLLAQRQHAMDVEHVLTKISLLHP
YESERIKLPPGSKAVKDLHISPSGKLALCASLGKKASILSMERNNFVIKYELPAPAWSCS
WDLDSEHHMYTGLQNGMLLLFDMRQTSGPVESMNGLTSHPIHTIHSLPDNSPLHNGGRSV
LTASSIGPCVWKTGIPGERPIVVPGLENQGVCISLAYSPITDDIVASFRPRVHTANDVVA
TQTSLSPSAAGRGQGVTGSHVLVKRVGGNSYHHIGSTLTCVNSVRLPKSVILNLENRNPL
FAYGDESTSGLCLRELPSLFTSQSLNRNQNAILDVKYSGTSERGLLGCVSEDKLQLFYLP
RGPNFG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgattacgctccttttgtcgatggattggtagtagaaggcactgaaagtgaa
ggagatgaaagtgaaactgaaagtggaagtggagcaagtgaaaccgaagaggaagaagaa
gaagaagaggaggaagaggaaggtgagggagaaccagaggtagtagtacctgctgttccg
tcggaagtggttaatgttgaagattcagaagaaaattgtgggaaaaaagagggagaaaca
tgtaaggcgtcaacgaaggagagtcatggtgatttaggaagtgagattgatggcgtatgt
tgtgggatttgtatggaaccttggtcatctgaaggtaatcatcaagttagttgtcttccg
tgtggacatgtatatggtttagcttgcataaagaaatggattcaacaaagtaggagaggt
ccttcaaagtgtcctcaatgtggtagtaagtgtacggtgaagaatataataaagctttat
gtttcgcgattggttgttactgatggagcgcaagaacagaaacttcactctcttaaggct
gaaaatgattttcttaagatgcagatagctgacttgaaggagaaaataaagcaagacaag
gaagcttggaacaaagagagagtgaagcggcaacgcgtggaaaatacatcactgggagat
gcgggtattagatcagtgaggtgcaattcggagcagatgttaaatggacgcaatcttggg
ttaaatcctgctaccggacaaggttatcccccttgcagatttaaattaatggatgagtta
gcagtagatggtggaaaggtattcgatatggatttctctcatgatatcctacttctagcg
caaagacaacatgcaatggatgtagagcatgtgcttaccaagattagcttgttgcatccc
tatgaaagtgagaggataaaacttcctcctggctcaaaagctgttaaggacttgcatatt
tccccttctggtaaacttgcactctgtgcttcattggggaagaaagcatctattctcagc
atggaaaggaacaattttgttatcaaatatgaattgccagctcccgcttggtcttgttca
tgggatcttgacagtgaacaccacatgtacactggactgcagaatggaatgttattgttg
tttgacatgcgccaaacatcgggacctgtggagtccatgaacggtctcacctctcaccct
attcatacgatacattctcttccagacaactcccctcttcataatggtggcagatcagtc
ctaactgcttcttctattggcccttgtgtgtggaaaactggtattcctggagaaaggcca
atcgtggttcctggattggaaaatcaaggagtatgtatatcgcttgcttatagtcccatt
actgatgatattgtggcttcatttcgtcctagagttcacacagcaaatgatgtggttgct
actcagacttcattatcaccttcagctgctggccgcggacaaggagtaactggttctcat
gttcttgtcaaaagagtaggtggcaacagttatcaccacatagggtctacattgacgtgt
gtaaatagtgttcgactgccaaaatcggttattttgaatttggagaatcgcaacccgttg
tttgcatatggagatgaatcaactagtggattatgcttgcgggagttgccatcattattt
acttcccagagtcttaaccgaaatcagaatgctattcttgacgtgaagtactcgggtact
tcagagagaggattacttggttgtgtaagtgaagacaagctgcaactcttttatttgcct
cgaggccctaacttcggttaa
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