Papaver somniferum (opium poppy): 113315046
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Entry
113315046 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113315046
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113315046
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
LVIVD
Motif
Other DBs
NCBI-GeneID:
113315046
NCBI-ProteinID:
XP_026419135
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Position
10:165851861..165860527
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AA seq
734 aa
AA seq
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MMSSVNTFCICTLRCLLLLILINNYAWDTSALSNLEDGVKLYVQDNHVVMDNGLVQVNIS
NPSGLVTGVQHNGIDNLLEILNEEQNRGYWDLYWTQRGNEGSQFLINGTSFKVIVQNETQ
VEISFTRTWNSSASSSSSNPSNSNSTEGLPLNFDIRYVMLKGSSGFYTYGIYEHLNGWPD
FNLNRTRVAFKLRKDKFQYVALSKTRQRRMPLPEDREPPRGEILQFKEATLLVDPVEPEL
KGQVDDKYMYAKNNEDIKVHGWVSSDPPVGFWHITASDEYRGGGPLKQDLTSHVGPISLT
VFFSSHYMGQDKIPMFGNGEPWKKVYGPVFLYLNSAPPGTNESALWDDADEQLQQEAQKW
PYSFIASTDYPKSDQRGTVNGRILVRDRFVSKEDIPAVDAYVGLALPGEVGSWQTECKGY
QFWTRAGPDGSFTIKNVHSGDYNLYAWVPGFIGDYKYGNLITVKAGMYTYITISLLLITS
VLRWLTYTHPFIIKTGESIELDDDLVYEPPRNGTTLWEIGIPDRTAAEFFIPDVNPKYVN
PLYMTQDRFRQYGLWEQYSFLYPKTDLVYTVNRSTYQKDWFYAQVTRKLGDAKYNSTTWQ
IKFNLDSVDQGTIYKLQVALASTTGAELQIRLNDLNTEIPHFTTGGMYKDNAIARYGIHG
LYLLFNVDVKSDWLKDGENTIFLSQVRGEGPFKGIMYDYIRLEAPADDERTNAEARLYRK
PTNYPTANLINSPM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctctgtgaacactttctgtatatgcacgttacgctgcttgttattgttaatt
ctaatcaacaattacgcatgggacacatctgctttgagcaatcttgaagacggtgtaaaa
ttgtatgtacaagataaccatgtggtgatggataatgggttagttcaagtgaatatatcc
aatccttctggattagtcactggagttcagcacaatggtatcgataacttgctagaaata
ctcaatgaagaacagaatagagggtactgggatctgtattggacccaaaggggaaacgaa
ggatcacaatttttgattaatggaactagttttaaggtaatagttcaaaatgaaactcaa
gttgaaatttcgttcacaagaacatggaattcctcggcttcctcatcgtcatcaaatcca
tcaaactcaaacagtacagagggtcttcccctcaactttgatataagatatgtaatgttg
aaaggctcgtcaggcttctatacatatggcatctatgagcacctaaatggatggccagat
ttcaatctcaacagaactagggtcgccttcaagcttcggaaagacaagtttcaatatgta
gctttaagtaagacacggcaaagacgaatgccactgccagaggatcgtgaaccaccaaga
ggcgaaatactacaattcaaagaagcaactctccttgtagaccctgttgagccagaacta
aaaggccaggtggatgacaagtacatgtatgcaaaaaataatgaagacataaaggttcac
gggtgggttagctctgaccctccagtaggtttctggcatatcacagcgagcgatgaatat
cgaggtggtggtcctctaaagcaggatctcacctcacatgttggtcctatatctctcaca
gtgtttttcagttcccactatatgggccaggataagatacccatgtttggaaatggagaa
ccttggaaaaaagtgtatggtccggtattcctatatcttaattcagctccacccggtaca
aatgaaagcgcattgtgggacgacgccgatgaacagctgcaacaagaagcccagaaatgg
ccgtatagtttcatagcttcaaccgactatcctaaatctgatcaaagaggcacagtcaat
ggaagaatactcgtccgtgacaggtttgtaagcaaggaagatatacctgcagtagatgct
tacgttgggttagctttaccaggagaagttgggtcctggcagacggagtgcaaggggtac
caattttggacaagagctggtcctgatggttcattcacaattaagaatgtacattctgga
gattacaatctctatgcatgggttcctggctttataggagattacaagtatggaaatctc
attacggttaaagcaggtatgtatacatatataacaatttctcttcttttaattacttca
gttttgcgctggttaacttatactcatccattcattattaaaacaggagaatccattgaa
ttggatgatgaccttgtttatgagcctccaagaaatggcactacgttgtgggagataggt
attcctgacagaaccgcagccgagtttttcatcccagatgttaaccctaaatacgttaat
ccactatacatgacgcaagacaggtttagacaatatggattgtgggagcagtacagtttt
ttatatccgaaaacagaccttgtttacacagtaaacagaagcacttaccagaaagattgg
ttctatgcgcaggttactcggaagttgggagacgctaagtacaactcaacaacatggcag
ataaagttcaacctagatagtgttgatcagggcacgatttataagttgcaagtggcactt
gcatccacaactggagcagaattgcaaattcgactcaacgatttgaatacagaaattcct
catttcacaactggaggaatgtacaaggataatgccattgcgagatatggtattcatgga
ctgtatttgttgttcaatgttgatgtaaagagtgattggctcaaagatggcgaaaacaca
atttttctttcacaagttagaggtgaaggtccgtttaaaggtataatgtatgactatata
cgtctcgaagcaccagcagacgatgaaagaacgaatgcggaagcaaggctatataggaag
cccactaattatccaacagctaacctaattaattctcccatgtag
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