Papaver somniferum (opium poppy): 113315060
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Entry
113315060 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein PMS1-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113315060
03460 Fanconi anemia pathway
113315060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113315060
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113315060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113315060
NCBI-ProteinID:
XP_026419157
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Position
10:complement(73559801..73565957)
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AA seq
987 aa
AA seq
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MEGGKGGGVPNEAMIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKD
FGEESFKIIDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKL
TVETRTKHESVASHLTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRRE
YGKLVSLLNAYALIAKGVRIVCTNTTGKNTKSVVIKTQGSNSMKDNIITVLGNNIFTCLE
PLSISISDSCEVEGFLSKPGQGSGRNLGYKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQ
YPIMVMNFIVPTRAYDVNVTPDKRKIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEE
HQKEGNGLNLCHHQEIPTLPLKRIPSKVYSNNEAECSEVQVVEDDSPIKTVKKRIPVSDV
EEGMVQIEGEKPSPKDFTLRAHAFGKADISSEYEYHSKKLRTSTPIGITEKRSRKDFTLR
AHSSGKADISSEYEYHSKKSRTSMPSAITDQRASPRSAEDGVAKNANSNSCLSLAQSSLT
KFISINKRKHENSCTVLSEMPVLRNEIVQCQVSKTNSDMQPDLSKSLVDHCQIDGCADVL
GKESSRCFKGTLESKEVESPSGAEGDVNVKGFEEVALLLGCQTVHHTKGDLEFGIRLPHI
DEVTSRPMVGKDLENISEEISGSGLPSKSSEMSLDAPVQSHRSEICSILQFNIRDLRTSR
EKRLSRLQSSGSMHGKTNSKGCYAAATLELSELDNNERKARSLVAATNELERLFNKKDFN
RMKVIGQFNLGFIIGKLEQDLFIVDQHAADEKFNFERMAQTTILNQQPLLQPMRLELTPE
EEVIASMHMDIIRKNGFSLVEDLGAPPGHHFKLRAVPFSKNITFGAEDVKELISALGDSH
GDCSIVSSYKLDTADSICPPRVRAMLASRACRSSVMIGDPLGKNEMQKILKHLAELRSPW
NCPHGRPTMRHLVDLTTLYRREEDIDD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaaaaggaggaggggttccaaatgaagcgatgattaaacctataaacaaa
agtgtagttcatagaatctgttcaggacaggtaatacttgacctatcatctgctgttaaa
gagttagttgagaatagtttagatgctggtgccacaagtattgaaatctccttgaaagat
ttcggagaagagtcattcaagattatcgataatggatgtggcatttcaccaaacaacttt
aaggttcttgcgttaaagcaccatacatctaaaatagcagatttccctgatctacagtct
ctgactacatttgggttcagaggggaggctctaagttcactttgtgcactagggaaatta
actgttgaaactagaactaaacatgaatcagttgcttcacacttgacttttgaccactcg
ggattactaacttgtgagaagaaaacagcacgtccaattggtactactgtcactgtcgag
aaattgttctccaccttgccagtcagaggcaaagaatttagtcgtaatattcgaagggaa
tatggaaagctcgtctctttactgaatgcatatgctctcatagcaaaaggagtacggata
gtgtgtaccaacacaaccggtaaaaacacaaaatctgtggtgattaaaacacaaggaagt
aactccatgaaagataacattataacagtgcttggtaataatattttcacatgcttagag
ccattgagtatatcgatatccgacagctgtgaagttgaaggtttcctttcgaagcctggt
cagggaagtggtcgtaatctggggtacaaacagttcttttttgtcaatggtcgaccagtt
gatatgccaaaagtcagcaagcttgttaatgaactttataagacttctagctccaaacaa
tatccaattatggttatgaacttcatcgtgccaacaagagcatatgatgtcaacgtaact
cctgataaaagaaaaatattcttttctgatgaaggttcccttatgcgctccttacgagaa
tctattgaaaaaatttattccccaagtcactgcagttattcaacaaataaagtcgaggag
caccaaaaggaaggcaatggcctaaatttatgtcaccatcaagagatacccactttgccg
ttgaagcgaatcccatcaaaagtctacagtaataatgaagcagagtgcagtgaggttcaa
gttgttgaggatgacagtcctattaagacagtcaaaaagcggatacctgtttcagatgta
gaagaaggaatggtacagatcgaaggtgagaaaccgtcaccgaaggacttcactcttaga
gctcatgcatttggaaaggctgatatttcttctgaatacgagtatcactctaagaaattg
agaacttctacgcctattggtataactgagaaacgatcacggaaggacttcacccttaga
gctcactcatctggaaaggctgatatttcttctgaatacgagtatcactctaagaaatcg
agaacttctatgcctagtgctataactgatcaacgtgcctccccaagatcagctgaggat
ggtgttgctaagaacgccaattccaacagttgtttaagccttgctcagtcatcacttacc
aaattcatttctatcaataagaggaagcatgaaaatagctgtacagtactgtctgaaatg
cctgtcctgagaaatgaaatagtgcaatgtcaagtgagtaaaaccaattcagatatgcag
cctgatctctcaaagtcccttgtcgatcactgccaaattgatggttgtgctgatgttctt
gggaaagagtcctccaggtgttttaaggggactcttgaatctaaagaagtagaaagtcca
tcaggtgcagaaggagatgttaacgtcaagggatttgaagaggtagcactgctgcttgga
tgtcagactgtacatcatacgaaaggtgacttagaatttggaattagattaccgcacatt
gacgaagtaacttcaagacctatggtgggcaaagatctagaaaacatatctgaggagatt
tcaggctcaggcctaccgtctaagtcttctgaaatgtctttagatgctccagtccagtct
catcgttcagagatctgctccattttgcagttcaatattagggatctaagaacaagtcgt
gaaaagaggctttcaagattacaatctagtggttccatgcatggaaaaacaaatagcaaa
gggtgctatgctgctgcaacattagagctctcagaactagataataatgaacgtaaagca
agatctctagttgctgcaactaatgagttggaaaggcttttcaataagaaagattttaac
agaatgaaggttattgggcagttcaatcttggctttatcattggaaagctagagcaggac
ctatttattgttgatcagcatgctgcagatgagaaatttaactttgagcggatggcgcaa
acaaccatcttaaatcaacagcctctgcttcagccgatgaggttggagctcactcctgaa
gaagaagttattgcatcaatgcatatggacataatcaggaaaaatgggttttctttggta
gaggatcttggtgctcccccaggccatcattttaagttaagagctgttccattcagtaaa
aacataacctttggagctgaagatgtcaaggagctaatatcggccctcggcgatagtcat
ggggattgctcaattgtaagtagttacaaattggacacagcagattctatttgtccacca
agagtgcgtgcaatgctggcatcccgggcttgcagatcatctgttatgataggtgatcca
ctgggaaagaatgagatgcaaaagatactcaaacatttggcagagctcaggtccccttgg
aattgcccccatggtagaccaacaatgcgacacttagtggacttgacaaccctctacagg
agggaagaagatattgatgattga
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