Papaver somniferum (opium poppy): 113315090
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Entry
113315090 CDS
T05758
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113315090
09124 Replication and repair
03420 Nucleotide excision repair
113315090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113315090
03400 DNA repair and recombination proteins [BR:
psom03400
]
113315090
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113315090
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113315090
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113315090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
113315090
NCBI-ProteinID:
XP_026419192
LinkDB
All DBs
Position
10:complement(67599990..67607623)
Genome browser
AA seq
1192 aa
AA seq
DB search
MYGGDEYDPAPMEEDEEEEITQEDAWPVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGRQSDFVETVYKISFGQIYLSKPMMTESDGETATLFPRAARLRNLT
YSAPLYVDVSKRIIKKGHDCEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSG
MFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDNQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEY
CETRKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
GYVQKCVDNGKDVNLQFAIRAKTITTGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGIMCPAETPEGQACGLVKNLALMVYITVGSA
ANPILEFLEEFGMENFEEISPAVIPQSTKIFVNGCWVGIHRNPEPLVKTLRRLRRRVDVN
TEVGVIREVRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRESPEEDGWHDLV
AKGYIEYVDTEEEETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRPN
RENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQQGQASRYTRRDHST
SMRHSESGMVDQVVLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHVGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSF
ECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKEVKQAKDTKKKGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaggagatgaatatgatcctgctccaatggaagaagatgaagaagaagagatt
acacaggaggatgcctggccggttatcagtgcttattttgaagagaagggtctagtgaga
cagcagctggactccttcgatgagtttatccaaaacactatgcaggaaatagtcgatgag
tctgcggatatagagattcgtcctgagtctcagcataatcctgggaggcagtccgatttc
gttgagactgtgtacaagatcagttttggtcagatttatctgagtaaacctatgatgact
gaatctgatggagagacagctactttgtttcccagagcagcacgattgaggaacttaaca
tattccgcacctttgtatgtggatgtctctaagagaatcataaagaaaggtcatgattgt
gaagaagttactgaaacacaggattttactaaagtttttattggaaaggttccaattatg
ctccggtcgagttattgcacattgtatcaaaattcggagaaagatttaacagagttagga
gagtgtccttatgatcaaggtgggtatttcattatcaatggaagtgagaaggttttaatt
gctcaggagaagatgagcaccaatcatgtgtatgtattcaagaagagacagcctaacaag
tacgcctacgtcgctgaagttcggtccatggcagagtctcaaaatagaccaccaagtggc
atgtttgtgcgaatgctttctcgggccagtgcaaaagggggttcttcgggacagtacatt
cgagctacacttccatatattcgcacagaaataccaattattattgtgtttcgggctcta
ggtttcgtcgctgacaaggatatcttggagcacatttgctatgacttctctgataatcag
atgatggagctgcttcggccctctttagaagaagcatttgtgattcaaaaccaacaggtt
gcactagattacattggtaaaagaggatccactgtgggtgtgacaagggaaaagaggatc
aagtacgcaaaagagatactccagaaagaaatgcttcctcatgttggcgttggggaatat
tgtgaaaccaggaaagcttactattttggatatatcattcatcgactgttgctatgtgct
ctcggtcgaaggcctgaggatgacagggatcattacggaaacaagaggctggaccttgct
ggtcctttacttggaggcctgttccgaatgctcttcaggaagttgacaagggatgtcaga
ggctacgttcagaagtgtgttgataacggaaaagatgttaatttgcaatttgcgataaga
gctaaaacaattacgactggtcttaaatactcccttgctaccgggaactgggggcaagca
aatgcagctggtaccagagctggtgtttcgcaggtgctcaatcgcctaacttatgcatca
actctctcccatttgcggaggttgaactcgccaatagggcgtgaagggaaactggcaaaa
cccaggcagctgcataattcacaatggggaataatgtgtccagctgagacaccagaagga
caggcctgtggactggtaaagaatcttgcgctcatggtttacataacagtaggttctgcg
gcaaatccaattttggaatttttggaggagttcggtatggaaaattttgaggaaatttcc
cctgcagtcattcctcaatccactaagatttttgtgaatggttgctgggttggtatccat
cgtaatccagagcctttggtgaagactctaagacggctgagaagacgggttgatgtcaat
acggaagttggagttattcgagaagttcgtttgaaagaactgcgactttatacagattat
ggacgctgcagtcgtccactgtttattgtggagaagcagaggctgttgataaagaaaaga
gatattcgagcattacagcaaagggaatcacctgaggaggatggctggcatgatcttgtc
gctaaaggatacatagagtatgttgacacagaggaagaagagaccactatgatttccatg
acaatcaatgatcttgtatctgcaagacataatccagaagaggcgtattctgaaacttac
acccattgtgaaattcacccatcgcttatattaggtgtttgtgcttctattatcccattt
ccagatcacaaccagtctccacgtaatacatatcaatctgccatgggtaagcaagcgatg
ggaatatatgtaaccaactatcagttgcggatggatacattggcatatgttctctactat
ccacaaaagcccctagttaccactcgtgcaatggagcacttgcacttcagacagctccca
gctggcattaatgctatcgttgcaattgcctgttattctgggtataatcaagaagattct
gttatcatgaatcaatcatcaatagatcggggtttcttccgttcgttgttcttccgttca
tacagagacgaggagaaaaagatggggacccttatcaaagaggattttgggcgcccaaac
agggagaatactatgggaatgagacatggctcttatgacaaactggatgatgatggcctt
gcacctcctggtacaagggtctcaggtgaagatgtcattattggaaagaccactcccatt
gcacaggatgatgctcaacaaggacaagcttcccgttacacacgtcgtgaccacagtacc
agcatgaggcacagtgaaagtgggatggtggatcaggtcgtattgacaactaatgctgat
ggtttgaggtttgtgaaagtaaggatgagatctgttcggatacctcagattggagacaag
ttcagtagtaggcatggtcagaaaggaactgtcggcatgacatacacacaagaagacatg
ccatggacagttgaaggcatcacacctgacatcattgtgaacccacatgctattccttct
cgaatgacaattggtcagcttattgagtgtatcatgggaaaggtcgcagctcatgtgggg
aaggagggagatgctactccctttactgatgtaacggtggacaatataagcaaagccctt
cataaatgtggatatcagatgcgagggttcgagactatgtacaatgggcatacagggagg
aagctgactgccatgatctttttgggtcccacttactatcagagattaaagcatatggtg
gatgataagattcattcacgtggaaggggacctgttcagatccttacaaggcagccagct
gaaggtcgatcccgtgacggaggtcttcgatttggggagatggagcgggattgtatgatt
gcacatggagctgcacacttcctgaaagaacgtttgtttgaccagagtgatgcctacagg
gttcatgtctgtgagcattgtggattgatagctattgccaatcttaaaaagaattccttt
gagtgcagaggttgcaagaataagaccgacattgttcaggtgtacataccctatgcatgc
aaactgctcttccaagaactcatgtccatggctattgctccaagaatgctcacaaaggaa
gtgaaacaagcaaaagatacaaagaagaaaggagcctaa
DBGET
integrated database retrieval system
