Papaver somniferum (opium poppy): 113315439
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Entry
113315439 CDS
T05758
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113315439
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113315439
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113315439
NCBI-ProteinID:
XP_026419500
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Position
10:complement(27577235..27586332)
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AA seq
357 aa
AA seq
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MVIIIPIPDTLRASLVLFIGIYIMSGCVDATYFNVMRYGAVGNGKKDDSKIFGKVIAPEM
SSWDDNDDKSWLVFDSIDGLTIQGPGQFDGRGSSWWKCRTDHKCSRAPTAFVANHCNHLK
IVGVYFVDAPMFHIVINGCDRVAISNIHITAPEDSMNTDGIHIGNSKNVYIDHSIIATVD
DCISIGNNSSYVFISKITCGPGHGISIGSLGADKSSAAVEMIRVTSCNFIGTMNGARIKT
WQGGSGYARDIKFENIYFDSVDHPIIIDQYYCNGDHNCETHKSAVKVSDVTFKGLRGTST
KQVAIDLACSKTVGCTDITLERIQVKHIKREKDTISNCINAHGISQGPVSPPVPCLS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggtgattataatccctatccctgatactttgagggctagtttagttttgttcatcggt
atctatatcatgtccggctgtgttgatgcgacatacttcaacgtcatgagatatggagct
gttggaaacggcaagaaagatgattctaaaattttcggaaaagtaatcgcgccagaaatg
tcatcgtgggacgataatgatgacaagagttggttggtattcgattcaatagacggactt
acaatccaaggaccaggccaatttgacggccgaggttcatcatggtggaaatgcagaacg
gatcacaaatgttctcgtgcacccacggcatttgtggccaatcactgtaatcacctgaag
attgttggtgtgtatttcgtagacgctccaatgtttcatatagtcataaacggatgcgac
agggttgcaatttctaacattcatataaccgcacctgaagacagcatgaacactgatggt
attcacatcggaaattctaaaaacgtgtatattgatcactccattatcgcaacagttgat
gactgcatttctattgggaataatagctcctatgtctttattagtaaaattacatgcgga
ccaggacatggaataagtattggaagtttaggagcagataaatcgagtgccgccgttgaa
atgatacgtgttactagttgtaattttatagggactatgaatggggcgagaatcaagaca
tggcagggaggatctggttatgcaagagatatcaagtttgaaaacatatattttgattca
gttgatcaccccattatcattgaccagtattactgcaatggtgatcataactgtgaaaca
cataaatcggccgtgaaagtgagtgacgtgacattcaaagggttaagaggtacatcaaca
aaacaagtggctatcgatctggcttgcagtaaaacagttggctgcacagacattactctc
gaaagaattcaagtgaagcatatcaaaagggaaaaagatacaatttctaactgtatcaat
gcccatggaatttctcaaggtcctgtttctccacctgttccatgtctttcctag
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