Papaver somniferum (opium poppy): 113316490
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Entry
113316490 CDS
T05758
Name
(RefSeq) zinc finger CCCH domain-containing protein 25-like
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113316490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113316490
Spliceosome [BR:
psom03041
]
Complex B
Other components
RES complex
113316490
Complex C
113316490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
zf-CCCH
zf-CCCH_DUS3L
zf_CCCH_4
Torus
RRM_5
zf-CCCH_4
zf-CCCH_PARP12
DUF1866
RRM_Nup35
BRAP2
zf-CCCH_12
Motif
Other DBs
NCBI-GeneID:
113316490
NCBI-ProteinID:
XP_026420443
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All DBs
Position
10:148842022..148842681
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AA seq
219 aa
AA seq
DB search
MNPLTLVKRIQQINSKEAALGISEKASWHVQYKESPYVFVGGIPYDLTEGDLLAVFAQYG
EIVDVNLVRDKATGKSKGFCFLAYEDQRSTNLAVDNLNGASVLGRVIRVDHVAKYKKKEE
TDEEEEQQKREERGVCHAFQRGECHRGASCKFSHNEQRAANTGWGAKEDTAARWGKYKYD
GPTKGHKITMWKDRQQNVKCKRLINVDNKELKRQKTLAT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttgacattagtaaaacgtatccaacagataaattcaaaagaagcagcacta
ggtatttccgaaaaagcttcatggcatgttcaatataaagaatctccttatgtatttgtt
ggtggtattccttatgatcttactgaaggtgatcttctcgctgtttttgcacagtatgga
gagattgttgatgttaatcttgtcagggataaagcgacaggtaaatcaaaagggttttgt
tttcttgcatatgaagatcagaggagtacaaaccttgctgtagataacttgaatggagct
agtgttcttggtcgagttattcgagttgatcatgtcgctaagtacaaaaagaaagaagag
acggatgaagaagaggagcagcagaagagggaggagcgtggtgtatgccatgctttccaa
aggggcgagtgtcatcgtggagcttcgtgcaagttttcacacaatgaacaaagagctgca
aacactggctggggtgccaaggaagataccgctgcaagatggggaaaatacaagtacgat
ggtccaacaaaaggtcacaaaattacaatgtggaaagatcgacagcaaaatgtcaaatgc
aaaagattaatcaatgtcgacaacaaagaacttaaacgtcagaaaacattggcgacatag
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