Papaver somniferum (opium poppy): 113316522
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Entry
113316522 CDS
T05758
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113316522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113316522
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113316522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF4833
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
113316522
NCBI-ProteinID:
XP_026420468
LinkDB
All DBs
Position
10:complement(150290768..150295871)
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AA seq
1036 aa
AA seq
DB search
MDYFSKSTPIAKRTRSKEAIYYKQVHAEIIKRKNRANGTSTNGNKKKKDNGLEGGVSSAT
AIPSPSSRGGKDFRTNNNKKLGGDGGGGRSATSRDGKGAQKDIVQMRKEDRLGKPTFLRS
YGFILQVIYKVLADIASKFSSDPKGQYGEDTDDGVALPEKWATNDNIQVEKERVFIDVDK
EDEDEEEEEIRAKGYKRKRAKVVKEFKKQSSVYKMPAMEMVSESSSDKDEAEEETEEITN
QFLEEIGVGIAPQLSSILKGGLPSKKGMSWKCTQASKNNSLLNLFLNTIWGKGEAGKKET
DPAETLIQYKFSYGVEKSVPKEKSDYEKEMDRLWDEFEFALRSSEDGTYAATIEDNEQQA
ETDPHTSCGLGNHEFIIDEEIGIRCMFCYYVKLDIKFILPAFGTSGARGRLSRRMSVDDE
HFPMIDSFLHHGTGGNQGSDLRGTGTVWDKLDKFPWIRGNLYPHQIEGFEFLWRNLAGGI
ALDVKNMNASDDVGGCIISHAPGTGKTLLTIAFLRTFMDTFKCCRPLLIAPSNMLLTWEE
EFKKWKVDISFHNLSSGKLSGKEDCAAQKLAQKERSIWWNRLAKIVSWSQGNSILAVSYR
LFEKLAAEELGGNNEEILGFKAKIRKIILERPNLIILDEGHTPRNKNSKIYKCLKNVKTE
RRIILSGTLFQNNFDELYTTLWLVRPKFADTISNERDKNCGALSRGNWVSLTSSIGRSSD
DQQLEKIQKMMKPFVHIHKGSILQKKLPGLRECVVVLHPSPLQRKFLKKVREGINNSFEF
DHAVAIVSVHPSLLTRCSVAKQSGQVNSFVTKLIDENQQIKDEGFRLNYNEGAKTKFLMQ
LIRLSEAMNEKVLVFSQYLDPNSLVCDHLCSALGWRMGEEILRMEGTLDVNKRQSLIHRF
NDPNSRAKVMLASLKACGEGICLTGASRIVLLDVVWNPSVYKQAISRAHRLGQKKVVYTY
HLIASRTPEEDKFRVQTRKDHLSQLVFSMEHGKIGNPDNRSSKYSDEILQSMMQNKKFKD
MFDKIIPRESTLLETL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggattacttctccaagtctacgccaatagcgaagagaacacggtctaaagaagccata
tactacaaacaagtgcatgcagagattattaagagaaaaaatagagcaaatggtactagt
actaatggtaacaaaaagaaaaaggataatggcttggaaggtggtgtgagttctgctact
gctattcctagtcctagtagtaggggaggaaaggattttcgtaccaacaacaataaaaaa
ttaggaggtgacggtggtggtgggaggtctgctactagtcgtgatggtaagggtgcacaa
aaagacattgtacaaatgagaaaagaggatagattagggaaacccaccttcttacgttcc
tacggatttatattgcaggttatttacaaagttttggcagatatagcttcaaagttttcc
tcagatcctaaaggtcaatatggtgaagatactgatgatggtgttgctcttccggaaaaa
tgggctactaatgacaatattcaagttgaaaaggaacgagttttcattgatgtggataag
gaggacgaggacgaggaggaggaggagattagggcgaaaggatacaagcgaaagagagct
aaggttgttaaggagtttaagaagcagtcttcagtttacaagatgcctgcaatggagatg
gtgtcagaatctagctcagacaaagatgaggcggaagaggaaacagaagagatcactaac
cagtttcttgaagagataggcgtgggtattgctccacagttatcctcaattcttaaaggt
gggttaccatccaagaaaggtatgagctggaagtgtacacaagcttcaaagaacaattcc
cttttgaatctctttctgaatacaatttggggaaaaggcgaggctggtaaaaaagaaact
gatcctgccgaaacattgatccaatacaaattctcttatggtgttgagaaatctgtgccc
aaggagaagtcagattatgagaaagaaatggatcggctttgggatgagtttgaatttgcg
ctcagatcttccgaggatggtacctatgctgctaccatagaagataatgagcaacaagct
gaaactgacccgcatacttcctgcggtttagggaaccatgaattcattatcgacgaagaa
atcgggattagatgcatgttttgctattacgtgaagttggacattaaatttatattgcca
gcctttggcacatcaggtgctagaggaagactgagcaggagaatgtctgttgatgatgag
catttccctatgatcgatagctttctgcatcacggaacaggtggtaatcagggttcagat
ctgcgtggtacaggaacagtttgggataagttggataagttcccttggataagaggaaat
ctgtatcctcatcagatagaaggttttgagtttttgtggagaaacttagccggaggaatt
gcacttgatgtgaaaaacatgaatgcttctgacgatgttggtggatgtattatttctcat
gcccctggaactgggaagactttgctgactattgccttcctccgaacgttcatggacaca
ttcaagtgttgcagaccccttcttattgccccaagcaacatgcttcttacatgggaggaa
gaatttaaaaaatggaaggtggacatttcttttcacaatcttagttctgggaaactctca
ggtaaggaagactgtgcagctcaaaaattggctcagaaagaaagaagcatttggtggaat
cgtcttgcaaagattgtttcttggagtcaagggaacagtatcttagcagttagctatcga
ctatttgaaaaacttgctgcagaagaacttgggggaaacaatgaagagattcttggtttt
aaggcaaagatcaggaagattatacttgaaaggccaaatttaataattctcgatgaagga
catacccccaggaacaaaaacagcaaaatttacaagtgtttgaagaatgttaaaacggaa
cggcgcataattctttcaggcactctttttcagaataattttgatgagctttacaccaca
ttgtggttggtaaggccaaaatttgctgatacaatctcgaacgaaagagataaaaattgt
ggagcactatcaagagggaattgggtttctttaaccagttctatcggaagaagctctgac
gatcaacagctggaaaagatacagaaaatgatgaagccttttgtgcatattcacaaagga
agcatattgcagaaaaaacttcctggattgagagaatgtgtagttgtcttgcatccatcg
cctttgcagaggaaatttctcaaaaaagttcgagaaggcataaacaattcatttgaattt
gaccatgcagtagcaatagtttctgttcatccctccttgttgactaggtgcagtgtggcg
aaacaatcaggacaggtaaactcctttgtgactaaactcattgatgaaaatcagcagatc
aaagacgaaggcttccggctgaattacaatgaaggagccaaaacaaaatttcttatgcaa
ctcataaggctcagtgaagctatgaatgagaaagttctggtattcagtcaataccttgat
cctaattcccttgtttgtgatcatctctgctctgctttgggttggagaatgggggaagag
atacttaggatggaagggacacttgatgttaataaaagacagtcgctgattcatcgattc
aatgatcccaatagtcgagctaaggtaatgcttgcatccttgaaggcttgtggagagggt
atatgtcttaccggtgcttcaagaattgttctgctagatgttgtctggaacccatcagta
tacaagcaagctataagcagagcacataggttgggccagaaaaaggttgtatatacttat
catctcattgcttcaaggacaccggaagaagataagttccgtgtacaaactcgaaaagat
cacttgtctcagttggtcttctccatggagcatgggaagattggaaacccggacaaccga
tcctccaaatactcagatgaaattctacaatcaatgatgcaaaataagaagtttaaggac
atgttcgacaagataataccaagagagtcgaccctgcttgagacattgtga
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integrated database retrieval system
