Papaver somniferum (opium poppy): 113316816
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Entry
113316816 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113316816
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113316816
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
EMC7_beta-sandw
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113316816
NCBI-ProteinID:
XP_026420751
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Position
10:165878931..165882147
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AA seq
528 aa
AA seq
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MLKGSSGFYTYGIYEHVNGMPGFNLNGTRVAFRLRKDKFQFMAKSKTRQRRMPLPEDREP
PRGKLLHFKEAALLVDPVDRELKGQVDDKYMYAQNIEGIKVHGWVSSDPLVGFWHITPSH
EYRSGGPLKQELTSHVGPRSLTVFHSSHYMGQHKLPIFGNGEPWKKVYGPVFIYHYKTMY
LNSAPPSTNESALWDDANEQLQQEAQKWPYSFIASTDYPKSDQRGTVNGRILVRDRFASK
EDIPAIDSYVGLALPGEVGSWQTECKGYQFWSRAGPDGSFTIKNVHSGDYNLYAWVPHCF
TYVHPYAIKTGDSIELDDDLVYEPPRNGTTLWEIGIPDRTAAEFFIPYVDPKYVNPLYLT
QDRFRQYGLWEQYSVLYSRTDLVYTVNSSNYKKDWFYAQVNRKLGDDKYNSTTWQIKFNL
DSVVQGTIYKLRVALASTTGAELQIRFNNLNTEIPHFTTGGLYRDNAIARHGIHGLYLLF
NVDVKSDWLKDGENTIFLSQVRGEGPFQGIMYDYIRLEAPADDERTNA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaggttcgtcaggattctatacatatggaatctatgagcacgtaaatggaatg
ccaggtttcaatcttaatggaactagggtcgccttcaggcttcgtaaagacaagtttcaa
tttatggctaaaagtaagacacgacaaagacgaatgccactgccagaggatcgcgaacca
ccaagaggcaaattactacatttcaaagaagcagctcttcttgtagaccctgttgaccga
gaactaaaaggccaagtggatgacaagtacatgtatgcacaaaatattgaaggcataaag
gttcacgggtgggttagctctgaccctttagtaggtttctggcatatcacaccgagccat
gaatatcgaagtggtggtcctctaaagcaggaactcacctcacatgttggtcctcgttct
ctcactgtgtttcatagttcccactatatgggccagcataagttacccatttttggaaat
ggagaaccttggaaaaaagtgtatggtccagtgttcatatatcactacaaaacaatgtat
cttaatagcgctccacccagtacaaatgaaagcgcattgtgggacgacgccaatgaacag
ctgcaacaagaagcccagaaatggccatatagtttcatagcttcaaccgactatcctaaa
tctgatcaaagaggcacagtaaatggaagaatacttgtccgtgacaggtttgcaagcaag
gaagatatacctgcaatagattcttacgttgggttagctttaccaggagaagttgggtcc
tggcagacggagtgcaaggggtatcaattttggagtagagcaggtcctgatggttcattc
acaattaagaatgtacattctggagattacaatctatatgcatgggttccgcactgcttt
acttatgttcatccatatgctattaaaacaggagattccattgaattggatgatgatctt
gtttatgagcctccaagaaatggtactacattgtgggagataggcattcctgacagaaca
gcagcagagtttttcatcccatatgttgaccctaaatatgttaatccactatacttgacg
caagacaggtttagacagtatggattgtgggagcagtacagtgttttatattcaagaaca
gaccttgtttacacagtaaacagcagcaattacaagaaagattggttctacgcgcaagtt
aatcggaagttgggagatgataagtacaactcaacaacgtggcagataaagttcaaccta
gatagtgttgttcagggcacgatttataagttgcgagtggcacttgcatccacaactgga
gcagaattgcaaattcgattcaacaatttgaatacagaaattcctcatttcacaactgga
ggactgtacagggataatgccattgcaagacatggaattcatggcttgtatctgttgttt
aatgttgatgtaaagagtgattggctcaaagatggcgaaaataccatttttctttcacaa
gttagaggtgaaggtccgtttcaaggtataatgtatgactatatacgtctcgaagcacca
gcggacgatgaaagaacaaatgcgtaa
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