Papaver somniferum (opium poppy): 113316851
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Entry
113316851 CDS
T05758
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113316851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113316851
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113316851
Complex B
113316851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
113316851
NCBI-ProteinID:
XP_026420785
LinkDB
All DBs
Position
10:11275524..11281384
Genome browser
AA seq
976 aa
AA seq
DB search
MADSPSLPPPPEIKQEIKTEIKSDSENQTDPSLPPPSLSSSTSLQSSSPSSSSLTHVSES
PNTNPSAVTLQPPQSLPPPPLIQSYQPNTGTIPPPGLQFRPIPQFSSIPNPNMQNPNFQN
PNIQNPNVLPPGVNPGGAGAVSISVSPLRPPGMYQGPPYQQMPNGYSTMPPGSIPPPGML
RYPNPYASMVRPAFPRPPGTMGMLPLLSRPPMPGIRGVPPIIQPVVRPVVPIVAPTEKPQ
TTVYVGKIASTVENDFMLPLLRLCGPVKSWKRAPESSDGTPRSFGFCEFESAEGVLRALR
LLTKINVDGQELVLNVNQKTREYLERYVEKKTEREKLKETETDGTEKEEESAPGVEKKEP
LKPSLEDPKKDVNDSADNEKQDTTQNFGVVTDEDREADQDVMDKLKNMIEERLKTKPLPP
PPALTPADASGKSNSEVPTKSRDAESDIDIMKTDVAEDKIDDEMTSENKTTSEHDTAETS
SPDKNRRHDRRSRDRDRERDLKREKERELERYERERERERVRKEREREIKIREAERLYKE
RVKEWESRERDREYQRQHEREREKERERERKREINDQESDSDDDSSRKRRRRSSMVEEKR
KKRLREKEEDMADRIREEEEIAEARRRAIEEQLQRKNEPENVPDQVNGGMEDVVMVDNAV
EDREDAVEKANEIDSLTSNHTDDVAMANGNSGDDSSMLSVSASDNRHCNVPARKLGFGLV
GSGKRTTVPSVFHEEDDDEANKDKKMRPLVPIDYSTEELQAVQPTAASGAAPPNLAAAAP
PNLAAAAEFAKRISSVNPKEERYEVERDRNRRSGDRSSHRDRDRDRNDEESNHVRDEVRD
KAHDREREREHGLNKLKTPENKKLLDAKQLIDMIPKTKEELFAYDINWDVYEKHELHERM
RPWISKKITEFLGEEEPTLVDYIVSSTKEHVRASQMLELLQSILDDEAEMFVLKMWRMLI
FEIKKVETGLSLKPKA
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctccgtctcttcctccaccaccagaaatcaaacaagaaatcaaaacagaa
attaaatcagattcagaaaatcaaacagatccttctcttcctcctccatcactatcttca
tcaacgtcattacaatcttcatcaccatcttcttcttctcttacacatgtatcggaatcc
cctaatacaaatccatcagcagtaactctacaacctccacaatcactaccaccacctcca
ttgattcaatcgtatcagcctaatacaggaacaatacctcctccaggtttacaatttcgt
ccgatcccacagttttcatcaattccaaatcctaatatgcaaaaccctaattttcagaac
cctaacattcaaaaccctaatgttctacctcctggtgtaaatcctggtggtgctggtgct
gttagtatatctgtttcgcctttacgtccacctggtatgtatcaaggaccaccttatcag
cagatgcctaatggatactcgactatgccgccaggatcgattcctcctcccggaatgctt
cgttaccccaatccttatgcttccatggttcgacccgcatttcctcgtccaccaggaaca
atgggtatgcttccattgttgtcacgtcctcctatgccagggattcgtggagttcctcca
atcatccagccagttgtcaggccagttgtccctattgttgctccgactgagaaaccacaa
accacagtttatgttggaaagatagcttctactgtagaaaatgacttcatgttgcctctt
ctgcgactttgtggacctgtcaagagttggaagcgtgctccagaatcaagtgatggaacc
ccaagaagctttgggttctgtgagtttgagtcagcagagggggttcttcgagccctgcgc
ctactaaccaaaatcaacgttgatggacaagagttggtgctaaacgttaatcaaaaaaca
agagaatacttggagcgctatgttgaaaagaaaactgagagggagaaattgaaggaaact
gaaactgatggtactgaaaaagaagaagagtctgctcctggagttgagaagaaagaacct
ctaaaaccctctttggaggacccaaagaaggatgttaatgattcagctgataatgagaaa
caggatactactcagaatttcggggttgttactgatgaagaccgagaagctgatcaggat
gttatggataagcttaaaaatatgattgaagaaaggttaaagaccaaacctctcccccct
cccccagcactaactcctgccgatgcttctggaaagtcgaactctgaagttccaactaaa
tcgagagatgcggagtcggatatcgatatcatgaaaactgatgtagcggaagataaaatt
gatgatgagatgactagtgaaaacaaaactaccagtgagcatgatacagctgaaacaagc
tcacctgacaagaatagaaggcatgataggagaagcagagatagggacagagagcgagat
ctgaaaagggaaaaggagcgagagttggaaagatacgagagggaaagagagagagaaagg
gtaagaaaagagagggaaagagaaataaaaatacgggaagccgagcgattgtacaaggag
cgggttaaggaatgggagtctagagaaagagacagagaatatcagcgccagcatgaaaga
gagcgggagaaggagagggaacgtgagcgcaagagggagatcaatgatcaggagagtgat
agtgatgatgacagctcaaggaaaaggagacgtaggagtagtatggttgaggagaagagg
aaaaagagactacgggaaaaggaggaggacatggcagaccgaataagggaagaggaagaa
attgctgaagcaaggaggagagcaatcgaggagcagctgcaacgcaaaaatgaacccgag
aatgttccagatcaagtcaatggtggaatggaggatgttgtcatggtagataatgctgtt
gaggatcgggaggatgcagttgaaaaagcaaatgagattgattctcttacgagcaatcac
actgatgacgtggcaatggccaatggtaatagtggcgatgactcgagcatgttatcagtt
agtgcttctgataataggcattgcaacgttccagctcggaagttagggtttggtctggta
ggatcaggaaaacgaacaactgtaccttctgtttttcatgaagaggatgatgatgaggca
aacaaggataaaaagatgaggcctctagttcccattgattattctacagaggaattacag
gccgtacaacctactgctgcttccggggcagcaccaccaaatttggctgcggcagcacca
ccaaatttggctgcggcagcagaatttgccaaacgtatttccagtgttaatcccaaagaa
gaaaggtacgaagtggaaagggatagaaatagacgctctggtgacaggtcgagtcaccgt
gatcgagatcgagaccggaacgatgaggagagtaatcatgtaagagatgaggtgagagac
aaggctcatgacagggaaagagagcgagaacatggtctaaataagctcaagacaccagaa
aataagaagcttttggacgcgaaacagttgattgatatgataccaaagacaaaggaggag
ttgtttgcatatgacataaactgggacgtgtatgaaaagcatgagctacatgaaagaatg
agaccatggatttctaagaaaattacagaattccttggggaggaggagccgacattggtt
gattatatcgtgtctagcaccaaagaacatgttcgtgcatcccaaatgctggagctgctt
caatccatcttggatgacgaggcagaaatgtttgtgcttaaaatgtggaggatgttaatc
tttgagatcaagaaagtagagacgggtctctccttgaagcccaaggcttga
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