Papaver somniferum (opium poppy): 113316941
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Entry
113316941 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113316941 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113316941
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113316941
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
RhgB_N
CarboxypepD_reg
ISK_Channel
Motif
Other DBs
NCBI-GeneID:
113316941
NCBI-ProteinID:
XP_026420886
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Position
10:165927135..165932780
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AA seq
733 aa
AA seq
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MMSSVKASGTCTLPYLLLLILINNYAWDTSALTNPDDGVKLHVQDNHVVMDNGLVQVNIS
NPYGLVTGIQYNGMDNLLESMNEFNHGGYWDLSWSQRGNKGTYFLMNGTSFNVIVQNETQ
VEISFTRTWNSSVSSSSSHISDKNNSTDWAPVNFDIRYVMLKGSSGFYTYGIYEHVNGMP
DFNLNGTRVAFKLRKDKFQYMAISKTRQRRMPLPEDREPPRGKLLQFKEAALLVDPVDRE
LKGQVDDKYMYAQNIEDIKVHGWVSSDPLVGFWHITPSDEYRSGGPLRQELTSHVGPHSL
TVFLSSHYMGQDKLPIFGNGEPWKKVYGPVFLYLNSAPPSTNESALWDDANEQLQQEAQK
WPYNFLASTDYPRSDQRGTVNGKILVRDRFVSMEDIPAVDAYVGLALPGEVGSWQTECKG
YQFWTRAGPDGSFTIKNVHSGDYNLYAWVPGFIGNYKYGNLITVKAGMYTYITISLLLIT
SVLRWLTYTHPFIIKTGESIELDDDLVYEPPRNGTTLWEIGIPDRTAAEFFIPDVDPKYV
NPLYLKKDRFRQYGLWEQYSVLYPKTDLVYTVNSSTYQKDWFYAQVTRKLGEKKYNSTTW
QIKFNLDSVDEGTIYKLRVALASTHGAELQIRFNSLGTEIPHFTAQGLNKDNAIARHGIH
GLYLLFNVDVKSDWLKDGENTIFLSQVRGKGPWESIMYDYIRLEAPAEDERKNAEARLSG
DLTQTSVTLKHPH
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctgtaaaagcttctggtacatgcacgttgccttacttgttattgttaatt
ctaatcaacaattacgcatgggacacatctgctttgaccaatcctgatgacggtgtaaaa
ttgcatgtacaagacaaccacgtggtgatggataatgggttagttcaagtgaatatatct
aatccttatggattagtcactggaattcagtacaacggtatggataacttgctagaaagc
atgaatgaattcaatcatggagggtactgggatctgagctggagccaaaggggaaacaaa
ggaacatattttctgatgaatggaactagttttaatgtaatagttcaaaatgaaactcaa
gttgaaatttcgttcacaagaacatggaattcctcggtttcatcatcttcttcacatata
tcagacaaaaacaacagcacagattgggctcccgtaaactttgacataagatatgtaatg
ttaaaaggttcgtcaggattctatacgtatggcatctatgagcacgtaaatggaatgcca
gatttcaatctcaatggaactagggtggccttcaagcttcgtaaagacaagtttcaatat
atggctataagtaagacacgacaaagacgaatgccactgccagaggatcgcgaaccacca
agaggcaaattactacaattcaaagaagcagctcttcttgtagaccctgttgaccgagaa
ctaaaaggccaagtggatgacaagtacatgtatgcacaaaatattgaagacataaaggtt
cacgggtgggttagctctgaccctctagtaggtttctggcatattacaccgagcgatgaa
tatcgaagtggtggtcctctaaggcaggaactcacctcacatgttggtcctcattctctc
actgtgtttcttagttcccactatatgggccaggataagttacccatattcggaaatgga
gaaccttggaaaaaagtgtatggtccggtattcctatatcttaattcagctccacccagt
acaaatgaaagcgcattgtgggacgacgccaatgaacagctccaacaagaagcccagaag
tggccgtataatttcctagcttccaccgactatcctagatctgatcaaagaggcacagtc
aatggaaaaatacttgtccgtgacaggtttgtaagcatggaagatatacctgcagtagat
gcttacgttgggttagctttaccaggagaagttgggtcctggcagacggagtgcaagggg
taccaattttggactagagctggtcctgatggttcattcacaattaagaatgtacattct
ggagattacaatctatatgcatgggttcctggctttataggaaattacaagtatggaaat
ctcattacggttaaagcaggtatgtatacatatataacaatttctcttcttttaattact
tcagttttgcgctggttaacttatactcatccattcattattaaaacaggagaatccatt
gaattggatgatgaccttgtttatgagcctccaagaaatggcactacgttgtgggagata
ggtattcctgacagaaccgcagccgagtttttcatcccagatgttgaccctaaatacgtt
aatccactatacttgaagaaggacaggtttagacaatatggattgtgggagcagtacagt
gttttatatccgaaaacagaccttgtttacacagtaaacagcagcacttaccagaaagat
tggttctacgcgcaggttactcggaagttgggagaaaaaaagtacaactctacaacatgg
cagattaagttcaacctagatagtgttgatgagggcacgatttataagttgcgagtggca
ctcgcatccacacatggagcagaattgcagattcgattcaacagtttgggtacagaaatt
cctcatttcacagctcaaggacttaacaaggataatgccattgcgagacatggaattcat
ggcctgtatctgttgtttaatgttgatgtaaagagtgattggctcaaagatggcgaaaat
accatttttctttcacaagttagaggtaaaggtccgtgggaaagcataatgtatgactat
atacgtctcgaagcaccagcggaggatgaaagaaaaaatgcggaagcaaggctatctggg
gatcttacccagacatctgtaactttgaaacacccccattaa
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