Papaver somniferum (opium poppy): 113317111
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Entry
113317111 CDS
T05758
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113317111
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113317111
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113317111
03019 Messenger RNA biogenesis [BR:
psom03019
]
113317111
03041 Spliceosome [BR:
psom03041
]
113317111
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113317111
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
113317111
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113317111
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113317111
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113317111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
113317111
NCBI-ProteinID:
XP_026421029
LinkDB
All DBs
Position
10:complement(41569664..41574184)
Genome browser
AA seq
307 aa
AA seq
DB search
MDASVLDSIINRLLEVRNKPGKQVQLSESEIRQLCVVSKEIFMQQPVLLELQAPIKICGD
IHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETVCLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALVDEKILCMHGGLSPDLHNLD
QIRNIQRPTDVPDTGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGADKVTEFLQKQDLDLI
CRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMSVDDTLMCSFQVLKPADKSRS
LALKYNI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtgttcttgatagtataataaatcgtttacttgaagtaagaaataaacca
gggaaacaagttcaattatctgagtcagaaattagacaactttgtgttgtttctaaagag
atttttatgcagcaacctgttcttttggagcttcaagcccccatcaaaatttgtggtgat
attcatggccaatattctgacctcttacggctgtttgagtacggtggactaccacctaag
gctaactacttattcttaggggattatgtagataggggcaagcaaagcctggaaacagta
tgccttttacttgcttataaaataaagtatccagagaactttttccttttgagaggcaat
catgaatgtgcatcgataaaccgtatctatgggttttatgatgaatgcaagagaagattc
aatgtcaggttgtggaaagtcttcacagattgttttaactgcctacctgtagctgccctc
gttgacgaaaagattttgtgcatgcatgggggtctttctcctgacctacataatttggat
caaattcgaaatatacaacgtccaactgatgtccctgacacaggtttgctttgtgatctt
ctgtggtcagaccccagtaaagatgttaaaggttggggaatgaatgatagaggagtttca
tacaccttcggtgctgataaagtgacggagtttcttcagaagcaggatctggaccttatt
tgccgtgctcatcaggttgtggaggatgggtatgagttctttgctaatcggcaactcgtg
acagtattttcagcacctaactactgcggtgagtttgacaatgcaggtgccatgatgagt
gtagatgataccttaatgtgctctttccaagtactaaagcctgctgacaaaagtcgttcc
ttggcgctaaagtataatatttga
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