Papaver somniferum (opium poppy): 113317549
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Entry
113317549 CDS
T05758
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03410
Base excision repair
psom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113317549
03450 Non-homologous end-joining
113317549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113317549
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113317549
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113317549
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
113317549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
HHH_5
BRCT
Cdd1
Motif
Other DBs
NCBI-GeneID:
113317549
NCBI-ProteinID:
XP_026421470
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All DBs
Position
10:complement(14818432..14822697)
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AA seq
534 aa
AA seq
DB search
MAPKRATTPKKRLTSAVDQESVGGGGLFHGLIFFLVDIGVQPRRLQIWKQKLVQMEGTVE
DQFSKRVAHILAMNSKALLEKVCKESLTHFKGSVLLYQWLEESLKLGEKVSEELYSLKTE
AEGDNESPKSIDRVTNKSEGSQSDDNESPRDKKARHSPEHASVSPAVSKESDRVKTRDGE
DNFDGDSFERSTNKDVSLPYAPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIE
ELPFKIESVDQVKHLPTIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIG
PATALKLYEKGHRTLNDLKNEDSLTHSQRVGLEYFEDIKKRIPRNEVQDMELLLQKAGEE
VLPGVSVVCGGSFRRGKATCGDMDIVITHPDGTSHKGFLAKYVKHLKDLNFLREDLIFST
HSEEGTDSGVDTYFGLCTYPGREMRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRIIAE
SKGYRLDDTGLFLATQGSDGKKGARATKSLSLNTEKEVLDFLGFPWLEPHERNL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagagagcaacaaccccaaagaagcggctaacttctgcagtggatcaagaa
tctgttggtggtggtggtctgttccatggtttgatctttttcttagtcgacattggagtt
caacctcgaagattacagatttggaagcaaaagttggtgcaaatggaagggacagttgag
gatcaattttcaaagagggtcgctcatattttagccatgaactcgaaagcccttcttgag
aaagtgtgtaaagaaagcttgactcactttaaaggaagtgtgcttctttaccagtggttg
gaggaaagcttgaaattaggagaaaaggtctctgaagagttgtacagtctaaaaactgaa
gcagaaggggataatgaatcacctaaatctattgaccgtgtcacaaataagtctgaaggt
agccaatccgatgataatgaatcaccacgtgataaaaaggccagacattcgcctgagcat
gcaagtgtttcaccagcagttagtaaagagagtgacagagtgaaaacaagagatggggaa
gataattttgatggagactcttttgaacgaagcaccaataaggatgtgtcactgccatat
gctcctcctgatttaaacaggaacatcactgagattttcggaaagcttatcaacatctat
agagcattaggagaggatcgtaggtcatttagctattacaaggctattccggtgattgaa
gagttgccgtttaaaattgaaagtgtggaccaggttaaacacttgcctacaattgggaaa
tcaatgcaggatcatatccatgagattgtgactaccggaaagctatcaaagctggaacat
tttgagaccgatgaaaaggtaaggacaatcaacctgtttggggaagtttggggtattggt
ccagctacagctcttaaactgtatgaaaaaggccaccgcacgttgaatgatttgaagaat
gaggactcactaacacattcacagagggtaggcttggagtatttcgaagatatcaagaaa
aggattccgcgcaatgaggttcaagatatggagcttctacttcagaaagctggtgaagaa
gttttacctggggtaagcgttgtctgcggaggatcatttagacgcggtaaagctacttgt
ggggacatggacattgtaattacacaccctgatgggacaagtcataaaggttttcttgca
aaatacgtgaagcatctgaaggatctaaacttcttaagagaagatttgatcttcagcacc
cacagcgaagagggtactgattcaggggtcgatacatattttggtctttgtacatatcct
ggtagggagatgcggcacaggatagacttaaaggtttacccgagggatatatatgcattt
ggactaatagcgtggacaggaaatgatgttctgaacaggaggttgaggattattgctgaa
tccaagggctaccgactcgacgatacagggctgtttttggctactcaaggttcagatggg
aaaaagggtgcacgagcaactaaaagtttgagtctcaatacagaaaaggaagtgttggac
ttcctgggctttccttggcttgaaccacatgagaggaatttgtga
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