Papaver somniferum (opium poppy): 113317805
Help
Entry
113317805 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 20-like
KO
K10779
transcriptional regulator ATRX
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113317805
03036 Chromosome and associated proteins [BR:
psom03036
]
113317805
Transcription factors [BR:
psom03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113317805
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113317805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
113317805
NCBI-ProteinID:
XP_026421717
LinkDB
All DBs
Position
10:133914548..133926182
Genome browser
AA seq
1476 aa
AA seq
DB search
MNEMVDMNNTDGQQEEIDDASSDSGSGDSFIDDSEDGEPSVSGHDDGSSPEAPLTDAEVE
ELIAELLEVESKAAEAQESLEKESLAQVEHEVRAELAVDLNQDELEAAVANEMRTYKEEW
ETVLDELETESAQLLEQLDGCGIDLPSLYKSIEKQAPDCCSTEAWKKRTHWAGSQVTSEV
SESIAHAEKYLHTKRPVIRKNGKMYEEGASGFLEKKLTDENGVDNESEDTKKIWESFENF
VATDNLSEADTSFGSKPWASVYLASTPQEAASLGLKLPGVDEVEEISDVNANEVAKEEIA
LSEEQKKNFRKVKEEDDANVELKLQLHLKRRRQRFRCKQEATKQEDDTSDLITEDKCNDS
IPSIDCSQGLDGEGVLDTVNGETSHSLKVDVLGKGETVGKFNEEKLFANGAPLGILNSEQ
RGEKRSHESEDADDDSKRSRTVIIDSDDEEHARDDKYVSSLQVKEEIDVVNVVNLPFLSS
NGTFHCTACAKVVVACEVREHPLLKVIVCESCRCIVEERMLEKDPDCCECYCGWCGRSNE
LISCKSCKLLFCTTCIKGNLGESFSLKIQASVWQCCCCAPSLLQQLTVECEKALLVEGFS
GTSSDSDSGQSENDTTKGLKRAKRRPKKRIRRILDDAELGEETKRKIAIEKARQEHLKSL
QAKSWIKKTESCLGTAVEGTTVDVLGDAIKGYIVNVVREKDEEAVRIPLSISSNLKPHQV
SGIRFMWENIIQSIKKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRQVDLGLKTALI
VTPVNVLHNWKYEFTKWKPEELKALRVYMLEEVPRERRIDLLTKWRNKGGIFLIGYAAFR
NLSLGKNIKDRNLAREYCNALQNGPDILVCDEAHMIKNRNADITVALKQVKCQRRIALTG
SPLQNNLMEYYCMVDFVREGFLGNSQEFRNRFQNPIENGQHTNSTADDVKVMNQRSHILY
EQLKGYVQRMDMNVVKKDLPPKTVYVIAVKLSQLQRILYKKFLDEHGFTNDKISGEKSRS
FFAGYQALAQVWNHPGLLRMSEQKNSARREVNVENFVVDGSSSDDNIEDDVSTGEKQKIK
NDLKKSGSGYINEGWWTNLLTEKNFKEVDYSGKMVLLLDLLSMSSEEGDKALVFSQSLTT
LDLIEFYLSKLPRKERKGKFWKQGKDWYRLDGSTPASERQKLVEKFNESTNSRVKCTLIS
TRAGSLGINLHSANRVIIVDGSWNPTYDLQAIFRAWRYGQRKAVYAYRLMAHGTMEEKIY
KRQVTKEGLAARVVDKQQVHRTMSREEMLHLFDFGDEESSDAVLGESQIPRNLFLTSQPA
GSLKQKISNGCSSSDKLMESLVSRHYPRWIANYHEHETLLQENEEEKLSKEEQDLAWETY
RRTIEGEEVQRIPIDDSTVERKPPVAPPLVALAAQVNQINSGLSRVSSRNHVNTRRCTIL
SHKLTLRSQGTKDDCATVCGECGQEISWGDLNRDPK
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatggtggatatgaataacactgatggacaacaagaggaaatagatgatgcc
tcaagtgattctgggtcaggggattcattcattgatgattcagaagatggggagccatcg
gtatctggacatgatgatggatcaagccctgaggcacccctgacagatgctgaagtagaa
gagctaattgccgagcttttggaagttgagagtaaggcggcagaggctcaagaatcactg
gaaaaggagtctcttgcgcaagtcgagcatgaagtgagagctgagttggcagtggatcta
aaccaagatgagttggaggctgcagttgcaaatgaaatgagaacttacaaagaagaatgg
gagactgtgctagatgaattagagactgagagtgcccagctgctggaacaacttgatgga
tgtggtattgatttaccaagtctctacaagtcgatcgaaaagcaggctcccgattgttgc
tcgacagaagcttggaagaaaaggacacactgggcaggttctcaagtaactagtgaagta
agcgaatccattgcacacgctgaaaagtatctacatactaagcgacctgtcattaggaaa
aatggtaaaatgtatgaggagggtgctagtggttttcttgaaaagaaactcaccgatgaa
aatggtgtagataatgagtccgaagatacaaaaaaaatttgggaatcttttgaaaacttt
gtcgcaactgataatttatcagaggctgatacatcatttggtagcaagccttgggcttct
gtttacttggctagtactccgcaggaagctgccagcttagggctgaagttgcctggagtt
gacgaggtggaggagataagtgacgttaacgcaaatgaagttgctaaggaggagatagcc
ctttccgaagagcaaaagaaaaacttcaggaaggtgaaggaagaagatgatgcaaatgta
gaactgaagcttcagcttcatttaaaacgaagaagacaaagatttagatgcaaacaggag
gctacgaaacaggaggatgacacctctgacctgatcacggaggacaagtgtaatgactcc
atcccttcaatcgattgttctcaaggtcttgatggtgaaggtgtattggatactgtcaat
ggtgagacgtctcattcattgaaggttgacgtgcttgggaagggtgaaactgttggcaag
tttaatgaggaaaagctatttgctaatggtgctcccttggggattctgaattctgaacaa
agaggggagaagcgttcacatgaaagtgaggatgccgatgatgactccaaaagaagtcgg
acagtgatcatagatagtgatgatgaagagcatgctagggatgataaatatgtttcctca
ttacaagttaaagaagaaatcgatgtggtaaatgttgttaatcttcctttcctgagttcg
aatggaacttttcattgcacagcatgtgccaaagtagttgtagcctgtgaagtgcgtgaa
cacccacttctgaaggtcattgtttgtgaaagttgcagatgtatagtggaagagaggatg
ctcgaaaaggaccctgattgctgtgaatgttattgtggttggtgtggaaggtccaatgag
ttaataagttgtaaatcatgtaaattgttattttgtacgacatgtatcaaggggaacctt
ggtgaaagtttttcattaaaaatacaagcctctgtttggcagtgctgttgttgtgctcca
tctctgctgcagcagctaactgtagaatgtgagaaggcccttctcgttgaaggtttttca
ggcaccagctctgatagtgattcaggacaatcagaaaatgataccaccaaggggttgaaa
agagctaagaggaggccgaaaaagaggattaggagaatccttgatgatgctgaactgggg
gaagagaccaagagaaagattgctattgaaaaggcacgacaagaacacctgaagtctctg
caagctaaatcatggataaagaaaactgaaagttgtctcggaactgcagtggaaggtact
actgttgacgtgctgggtgatgcgataaaaggttatatcgtaaatgtggtgagggaaaaa
gacgaggaagctgtaaggattcctctgagtatctcatcgaatttaaagccccatcaggta
tcaggtatacgattcatgtgggaaaatatcatacaatctatcaaaaaggtgaaatccggg
gacaaaggtcttggttgcatactagctcatactatgggccttggtaaaacttttcaggtg
atagcttttctatacactgctatgagacaagtagatctcggacttaaaactgcccttatt
gtcactcctgtgaatgtgctacacaattggaaatatgagtttacgaagtggaaacctgag
gaactaaaggctcttcgtgtttatatgctagaggaagttccaagggagagaaggatagat
ttacttacaaagtggagaaataagggaggtatctttttgattggttatgctgcttttcgt
aacttgtctctgggaaagaatataaaggacaggaatctggctagggaatactgcaatgcc
ctacagaatggacctgatatattagtatgtgatgaggcccatatgatcaagaacagaaat
gctgatataacagtagcattgaaacaagtgaagtgccagagaagaattgctctaacagga
tcacctctgcagaacaacttaatggaatactattgtatggttgattttgtaagagaagga
ttccttggcaacagccaagagttcagaaaccggtttcagaatcctattgaaaatggtcaa
catactaactccacagctgatgatgtaaaagttatgaaccaacggtcacatatcctctat
gaacaacttaaaggttacgttcaaagaatggacatgaatgtggttaagaaagatttgcct
cctaaaacagtatacgtaatagcagtaaagctttcacaattgcaaaggatattatacaaa
aaatttcttgatgagcatggcttcacaaatgacaaaatctctggtgaaaagtctcggagc
ttttttgcgggatatcaagcattagctcaggtatggaaccatcctgggctattgcgaatg
tccgaacaaaaaaatagtgctagacgtgaagtgaatgtggaaaattttgttgtggatggc
agctctagtgatgataacatagaggatgatgtatcaactggagagaagcagaagataaag
aatgatctcaaaaagagtgggagtggctatatcaacgagggttggtggacgaatcttctt
actgaaaagaactttaaagaggtcgattatagtggtaaaatggttttgctacttgatttg
ttgtctatgagttctgaagagggtgacaaggctttagttttcagccagagcctaacaacc
ctagatctcattgagttttatctttctaagttaccaagaaaagaaagaaaaggaaaattt
tggaaacaaggaaaagactggtacaggttggatggaagtacaccagcttctgaaagacaa
aaattggtagagaagtttaatgagtctacaaatagtagggtaaaatgcaccttgatctca
acacgagctggatcgttgggaataaaccttcattctgctaatcgagttattattgttgat
ggttcttggaatccaacttatgatcttcaggctatatttcgggcttggaggtatggccag
aggaaggcagtgtacgcttatcgattgatggctcatggaaccatggaagaaaagatatat
aaacgtcaggtcacgaaggaggggcttgctgcaagagtggtggataaacaacaagtacat
agaactatgtctagagaggagatgttacatctctttgattttggcgacgaagaaagttca
gatgcagttttgggagagagtcaaattccgaggaatttgtttttgacaagtcagcctgct
ggttcactaaagcagaagatttctaatggatgctcttcttctgacaagttaatggagagt
ttagttagcagacattatccgcggtggatagccaattaccatgaacatgagacacttttg
caagaaaatgaagaagagaaactatccaaagaagagcaagacttggcttgggagacgtat
cgcagaactatagaaggggaagaggttcagagaattccaattgatgattcaacagttgag
cgcaagcctcctgttgctcctccacttgtggccctggctgcacaagtgaatcaaatcaac
tctggactatccagggtaagttcgaggaatcatgtgaatacacgtagatgtacaattctt
tcacacaagcttacactaagaagtcagggaacgaaagatgattgtgctacggtttgtggg
gaatgtggccaagagattagctggggggacctcaaccgagacccaaagtga
DBGET
integrated database retrieval system
