Papaver somniferum (opium poppy): 113318060
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Entry
113318060 CDS
T05758
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113318060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113318060
03012 Translation factors [BR:
psom03012
]
113318060
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113318060
Translation factors [BR:
psom03012
]
Eukaryotic type
Release factors
113318060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
113318060
NCBI-ProteinID:
XP_026421973
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Position
10:complement(115614411..115617331)
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AA seq
436 aa
AA seq
DB search
MSDGQDTDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVARVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIMTDDGKEKKVTIDFEPFKAIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQMYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVEDTLKTLEMGAVETLIVWENLDINRYVLKNSATAEIVIKHLNKDQEADQSNFRD
SETSAELEVQEKTSLLEWFANEYRKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RQFDELSDGEVYEDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggtcaggatactgataagaatatcgagatatggaagatcaagaaattgatt
aaagcgctagaagctgctagaggtaatggtacaagcatgatttctctcatcatgccacca
cgagatcaggttgctcgggtcactaagatgttgggtgatgaatttggtactgcctcaaac
atcaagagtagagttaaccgtcagtcagtattgggtgcgattacctctgctcaacagaga
ttgaaactttacaataaggtccctccaaatggtttagttttgtacacaggaactatcatg
acagatgatgggaaggagaagaaggttacaattgattttgagcctttcaaggcaattaat
gcatcattgtacctttgtgataataagtttcatacagaggctctaaatgaacttttggaa
tctgatgacaagtttggtttcatagtcatggatggaaatggtacactttttgggacacta
agtgggaacacacgtgaagtgcttcataagttcacagtcgatctcccaaagaaacacggt
agaggaggacaatctgctctgcgttttgctcgtcttcgaatggagaagcgtcacaactat
gtgagaaaaactgctgagcttgcaacacaaatgtacatcaatccagccactagtcagcct
aatgtctcagggttaattcttgctggatctgctgatttcaagacagagctgagtcagtcc
gatatgtttgatccccgtcttcaggccaagatactgaatgtggttgatgtttcttatgga
ggtgagaatggtttcaatcaagccattgagctttctgccgagattctatctaatgtgaag
ttcattcaggaaaaaaaattgattggtaagtatttcgaggagattagtcaagacacaggg
aagtacgtatttggtgtggaagatactctgaaaactctagaaatgggtgctgtagagaca
cttattgtgtgggaaaatctggacatcaacagatacgtactgaagaacagtgccactgcg
gagatagttatcaagcatttgaacaaggatcaagaagctgatcaaagtaactttagggat
tcggaaacctctgcagaattggaggttcaagaaaagacttcattgttggagtggtttgct
aacgagtaccgaaaatttggatgtacacttgagtttgttaccaacaaatcccaagaaggg
tcccaattttgtagaggttttggaggcattggaggtatcttacgttaccagcttgacatc
aggcagtttgatgagttgtcggacggggaagtatatgaagattcggattag
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