Papaver somniferum (opium poppy): 113318405
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Entry
113318405 CDS
T05758
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113318405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113318405
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113318405
Hops complex
113318405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
APC_rep
Motif
Other DBs
NCBI-GeneID:
113318405
NCBI-ProteinID:
XP_026422354
LinkDB
All DBs
Position
1:229352866..229358590
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AA seq
958 aa
AA seq
DB search
MYQLKKFEFFEEKNPGKCSVPEEVKGKINCCSSGRGKIVVGCDDGMVNLLDRGFKFNHGF
QAHATSVLFLQQLKQRNFLITIGEDEQTSPQLSHICLKVFDLDKTQPEGSSTTAPDCVQM
RIFTNQFPEAKITSFLVLEEAPPILLISIGLDNGCIYCIKGDIARERISRFQLQVETVTD
KSDASITGLGFRVDGQALQLFAVTPTSVSLFNLQDKPPRRHTLDQIGCNTNCVAMSDRLE
LIVGRPEAVYFYEADGRGPCSAFEGEKKFVGWFRGYLLCVIADQRNGKNTFNIYDLKNRL
IAHSTVISEVSHLICEWGNVILIMSDRTVISVGEKDMESKLDMLFKKNLYTVAINLVRSQ
QADAAATAEVLRKYGDHLYGKQDYDGAMSQYIYTIGYLEPSYVIQKFLDAQRIYNLTNYL
EKLHEQGLGSKDHTTLLLNCYTKLKDVEKLNVFIKGEDGIGEHKFDVETAIRVCRAAGYH
EHAMYVAKKAGKHEWYLKILLEDLDEYQEALQYISSLEPSQAGITMKEYGKVLVEHKPVE
TVEILMKLCTEEEESTGGGTLDGTFLSMLPSPVDFLNMFVHHPKSLMDFLERYISKVRES
PAQVEIHNTLLELYLSSDLNFPSMAQEIIGEGLNLGRSSTVGGSLAKSESKEKLAADNKD
KDKEKDRLERLKKGLSLLKNGWPSDLEHPLYDVDLAIILCEMNAFKEGLLFLYEKMKLYK
EVITCYMQAHDHEGLIACCKKLGDSNCGGDPSLWGDLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVLQTLAKNPCLTLSVVKDYISRKLEKESKLIEEDHRAVEKYQETTLNMRKE
IHDLRTNARIFQLSKCTLCTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVMD
LKKSLEHNSKDHDRFFQQVKNSKDGFSVIAEYFGKGIVSKTSLTEAQKTANFPSRNGF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaattgaagaaatttgagttctttgaagaaaaaaacccaggaaaatgctcagtt
cctgaagaagttaagggaaagataaattgttgttcaagtggtagagggaagatcgttgtt
ggatgtgatgatggtatggtcaatttacttgatcgtggattcaaatttaatcatggattt
caagctcatgctacttctgttcttttccttcaacaactcaagcaacggaatttcctgatt
actattggagaagatgaacaaacgtccccacaactatcacatatctgcttgaaagtgttt
gaccttgataaaacacagccagagggttcaagcaccaccgctcctgattgcgtccaaatg
cggatatttaccaatcaatttcctgaagcaaagattacatcatttttagttctcgaggaa
gccccaccaatattactcatctctataggtttggacaatggttgcatttactgcattaag
ggggatattgcacgtgagcgtatctctcgtttccagcttcaggtagagactgttacagac
aagtccgatgcttctattacagggttagggttccgagttgatggccaagctcttcaacta
tttgctgtgactccaacttccgtaagcctgttcaatttgcaagataaacctccgagacga
catacccttgatcagattggatgtaatactaattgtgttgctatgagtgatcgtttggag
ctgatagttgggcgtccagaggctgtgtacttctatgaagctgatggacgtggtccttgt
tcggcctttgagggagagaagaaatttgttgggtggtttcgtgggtatttattgtgtgtt
attgcagatcagagaaacgggaagaatacattcaacatttatgatctgaagaacagattg
attgcccacagtactgtgatcagtgaggtttcacacttaatttgtgaatggggtaacgtt
attctcataatgagtgatagaacagttatttctgttggagaaaaggacatggaaagcaaa
ttggatatgcttttcaaaaagaatctgtatactgttgctattaatcttgttcgaagtcag
caagctgatgcagcagcaaccgcagaagtactaaggaaatacggggatcatttatacgga
aaacaggattatgatggagctatgtctcagtatatatacaccatagggtaccttgaacct
tcttatgtcatacaaaagtttttagatgctcaacgcatctataaccttacgaattacttg
gagaaacttcatgagcaaggtttgggctctaaagaccacacgactcttcttctcaattgt
tatactaagttgaaggatgttgaaaagctaaatgtattcataaaaggcgaggatggcatt
ggagagcataaatttgatgtggaaactgcaataagagtctgtcgtgcagcaggataccat
gagcatgcaatgtatgttgctaagaaggctgggaaacacgagtggtacttaaaaatcttg
cttgaagacctcgatgaatatcaagaagcattgcagtatatttcaagccttgaaccaagt
caagctgggatcaccatgaaagagtatggtaaggttctcgtagagcacaagccggttgaa
acagttgagatacttatgaaactttgtactgaagaagaagaatctactggtggaggcacc
ttagatggcacattcttatccatgttgccttctccagttgattttctcaacatgttcgtt
catcaccccaagtcccttatggattttcttgagagatacatcagcaaggtgagggaatca
cctgcacaagttgaaattcataatacacttttggaattatatctttctagtgacttgaac
ttcccgtccatggcacaagaaatcattggggaaggactcaatcttggtagaagctcaact
gtaggagggagtcttgccaagtcagagtcaaaggagaaacttgctgcagacaacaaagat
aaagataaagaaaaggatcgtttggaacgactaaaaaagggactttccctgcttaaaaat
ggctggccttccgatttagagcatccgttgtacgatgttgacctggcaattattctttgt
gagatgaatgcattcaaggaaggcttgttatttctgtatgagaagatgaagctctataaa
gaagttattacttgctatatgcaggcccatgatcacgaggggttgatagcatgttgtaag
aagctgggagattcaaactgtggaggagacccttctctttggggagatttgctaaagtac
tttggcgagcttggggaagattgctccaaagaagtaaaggaagttctgacttatattgag
agggatgatattttacctccaattattgttcttcagacacttgctaagaatccatgcctc
actctttcagtggtaaaggattatatttctcgaaaacttgaaaaggaatcaaaattgatt
gaagaggatcatcgagctgttgagaaataccaggaaaccaccttaaacatgaggaaagaa
attcatgatcttcggaccaatgcaagaattttccagcttagtaagtgtactttatgcact
ttcactcttgatctccctgccgtccattttatgtgcatgcactcatttcaccagcggtgc
cttggcgacaatgagaaagaatgtcctgagtgtgctcccgagtacagatctgtcatggat
ttgaagaaaagtttagagcacaattccaaagaccatgaccgcttcttccagcaagtaaag
aattcgaaagacggcttttctgtgattgcagagtattttgggaagggtatcgttagcaaa
acaagcctaacagaagctcagaagacagcaaattttccctccagaaacggtttctaa
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integrated database retrieval system
