Papaver somniferum (opium poppy): 113318460
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Entry
113318460 CDS
T05758
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113318460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113318460
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113318460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
113318460
NCBI-ProteinID:
XP_026422407
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Position
10:complement(12193955..12198004)
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AA seq
486 aa
AA seq
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MATLADSFLADLDDLSDNEANVPHEDEGHESDMDEDSDGDIADIEALNYENLDSVSKLQK
SQRYIDIMQKVEAALQKGSETEEQGFSSEDDPEYQLIVDCNALSVDIENEIVIIHNFIKD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLVPSAVIMVVSVTASTTVGKP
LPEDSLNKTIEACDRALALDIAKKEVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
TALAKMPACNVQLLGAKRKTLAGFSTATSQYRVGYLEHTEIFQTTPPALKMRACRVLAAK
STLAARVDSIRGDPTGKTGRNLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAA
KVAKKSKIKSYGSVSGTTSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEVGTF
SKIKRI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctacacttgctgattctttcttggcggatcttgatgatttatcagataatgaagct
aatgttcctcacgaggatgaagggcacgaaagtgatatggatgaagatagtgatggtgac
attgctgacatagaagctttaaactatgagaatctggatagtgtctctaaattgcagaag
tcacagcgctacatcgacataatgcagaaagttgaagctgcactacagaaggggtctgaa
actgaggagcaaggctttagttcagaagacgatcctgaatatcaacttatagtagattgc
aatgcactgtcggttgacattgagaatgagatagttatcattcacaattttatcaaggat
aagtatcggcttaaatttcctgagctcgagtctctggttcatcacccaattgattatgcc
agagtggtaaagaagattggaaatgaagtagatttaaccctagttgatttggaagggctc
gtaccatcagctgtcattatggttgtatctgttacagcgtccactactgttggaaagcca
ctccctgaagattctctcaataagactattgaagcctgtgatcgagctcttgctcttgat
atagcaaaaaaggaagttctcgactttgtagagagtagaatgggatatattgcaccaaat
ctatctgctatcgttggaagtgctgttgctgcaaaacttatggggaccgctggtggtttg
acagcattagctaagatgccagcctgtaatgttcagcttcttggtgcaaagagaaagact
ctggcaggattctctactgcaacttcgcaatatcgtgtggggtatcttgagcacactgaa
attttccaaactacacctcctgctttgaaaatgcgcgcttgccgagttttggctgcaaaa
tcaacacttgcagcaagagttgattcaataagaggagatccaacagggaagacgggaagg
aacttgagggaagagatccgaaagaaaattgagaagtggcaagagccgcctccagcaaag
caaccaaaacctcttccagttcctgattccgagcctaaaaagaaaaggggtggtcgtcgt
ttgcggaaaatgaaggagaggtatgcagtaacagatatgaggaagctggccaacagaatg
cagtttgggatacccgaggagagctcgttaggggatggactcggtgaaggttatggtatg
cttggtcaggctggaaatggcaagttgcgtgtatcagttggccaaagcaaacttgctgca
aaagttgctaagaagtccaagattaaaagctacggaagcgttagtggtactacctcaggc
ctaacctcaagtctagcattcacacctgtacaaggaattgaactctcaaatcctcaggcc
catgcaaatcagctaggtagtggaactcaaagcacctacttctcagaggtgggcaccttt
tcaaaaatcaagaggatttga
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