Papaver somniferum (opium poppy): 113318477
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Entry
113318477 CDS
T05758
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113318477
03036 Chromosome and associated proteins [BR:
psom03036
]
113318477
Transcription factors [BR:
psom03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113318477
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113318477
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
113318477
NCBI-ProteinID:
XP_026422426
LinkDB
All DBs
Position
10:complement(21460688..21468684)
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AA seq
642 aa
AA seq
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MTDGPLYNNILLGGRGGTNSGQLRVHPGGIAWKKQGGGKVVEVDKVDVVGVTWMKIPRTY
QLGIRTKDGVFYKFTGFRDQDVSSLTTYIQTNIGVTPAEKQLSVSGRNWGEVDLNGNMLT
FVVGSKHGFEVSLADVSQTQMQGKNDVVLEFHVDDTTGANEKDSLVEMSFHIPNSNTQYV
GDENRPPAQVFRDKIMSMADVGPSGEEAVVTFEGIAILTPRGRYSVELHASFLRLQGQAN
DFKIQYSSVMRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETEFVVESTLSLS
EDVLNTKYKGKLEPSYKGLIHEVFTSILRGLCGAKITRPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIEFVEFERHAAAGTNMHYFDLLVKLKSEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDGPTAKMGEPDVPDDDALDPHLERIKNAVEESDEEDSD
YSVKGVEDDGGSPSDDSGGEDSDASLSGAEKEKPTKKESKKEASTSKPAPASKRKPKDGD
EDGGKKKKPKKKKDPNAPKKAMSGFMFFSQTERENIKKSNPGISFTDTAKALGEQWKKMT
AEEKEPFEAKAKADQKRYKDAMAGYKGDAPTTIIDSGNESSE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacggatggtcctctttacaataacattcttcttggtggtcgtggcggcaccaactct
gggcagctgagagttcatccagggggtattgcatggaagaagcagggtggtggaaaagtg
gttgaagtcgacaaagttgacgttgttggtgtaacatggatgaaaattcctaggacatat
cagcttggtattcgaacaaaggatggtgtgttctacaagttcacaggtttccgtgatcag
gatgtaagtagcttgacaacatatattcaaaccaatattggagtaacaccagcagaaaaa
cagctttctgtaagtggaaggaattggggagaagttgatctaaatgggaatatgctaact
ttcgtggtaggttcgaagcatggttttgaagtatcgttagcagatgtctcacagacacag
atgcaaggaaaaaatgacgttgtcttggaatttcatgtggatgacaccactggtgctaat
gagaaagattcgttggttgaaatgagttttcacatacctaattccaatacacaatatgtt
ggtgatgaaaatcgtcctccggcacaggttttccgtgacaaaattatgtcaatggcggat
gttggtccatcgggcgaagaagctgttgtcacgtttgaggggattgccatccttacgcct
aggggtagatacagtgttgaactgcacgcatcatttttacggctccagggacaggccaat
gattttaaaattcaatatagcagtgttatgcgcttgtttcttttacccaagtccaatcaa
ccacatactttcgttgttgttactctagacccgccaatccgaaaagggcaaaccttgtac
ccgcatatcgtattacagtttgaaacagaatttgtggttgaaagtaccttgtcactaagt
gaggatgttttgaataccaagtataagggcaagttagaaccatcatacaaggggcttatt
catgaagttttcacttccatcttgcgtggtttatgtggcgccaaaattactaggccagga
aagttccgtagttgtcaagatggatatgcggtgaagtcttctttgaaagctgaagacggt
gtattgtatcctctcgagaagggtttcttctttttacctaaacctcctaccctcattctc
cacgatgagattgaatttgtggagtttgagaggcatgcggctgcaggcacaaatatgcac
tactttgatcttcttgtcaaattaaaaagcgagcaagaacatctctttcggaatattcaa
agaaatgaatatcataatctctttgacttcattagtggcaagggtttgaaaatcatgaac
cttggggatggcccaactgcaaaaatgggagaacctgatgtgcctgatgacgatgctctt
gatccccatcttgagcggattaaaaatgctgttgaagagagtgatgaagaggattctgat
tattccgtgaaaggtgttgaggatgatggtggatctcctagtgatgactcaggaggggag
gattctgatgcaagtttaagcggagcagagaaagagaagcccacgaagaaggaatctaag
aaagaagcttctacatccaagccagcgccagcaagtaagaggaaaccaaaagacggagat
gaagatggtggaaaaaagaagaaacccaagaaaaagaaggatccaaacgcaccgaagaag
gctatgtctggtttcatgtttttctcacaaactgaaagagaaaacataaagaaaagtaac
cctggaatatcatttactgatacggcaaaggcacttggagaacagtggaagaaaatgaca
gccgaggagaaagaaccattcgaagcaaaggccaaggctgatcagaaacgttacaaggat
gccatggctgggtataaaggcgatgctccgacaacaattattgattcagggaatgaatct
agtgagtag
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