Papaver somniferum (opium poppy): 113318555
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Entry
113318555 CDS
T05758
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113318555
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Other 90S particles
113318555
Pre-60S particles
Other pre-60S particles
113318555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
WD_LRWD1
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_IFT122_2nd
TMEM215
Motif
Other DBs
NCBI-GeneID:
113318555
NCBI-ProteinID:
XP_026422511
LinkDB
All DBs
Position
10:complement(33352577..33358087)
Genome browser
AA seq
525 aa
AA seq
DB search
MISAISWVPKGIAKVIPAEVDPPTKEEIDEILRSGTLNRREDSDNENDGEMDVDGAAKGV
AYEAAAKVKQPRSGTSFGIMKKCTLVDAAKGVADEISQALAAAEALGRKQPGSSTSFGTK
DMTDALKELDMENYDEEDDGIEIFSTAIGDRYYPSNAMDPYLKKDDEDEDDDEEIEDMTI
KPSDAIIVCARTDDEVSQLQVCVLEESEDGELNFYSHHDIILSALPLCTARIDWDINGGG
KGNYIAVGTLDLAIEIWDLNLIDEIQPFLALGGVAKKKKKTAKYKKGGSHTDSVLGLDWN
KKLKYLASASADKSVKVWDFETEKCRTTVNHHTDKVQAVAWNAHSPNFFLSGSFDRSVIL
VDERNPSRVCTKSIVTADVECLAWNPHDQHSCLVSLEDGTVQGFDVRVASSDPAAARLEP
TFTLQAHDKPVTSISYCPTAPKLLATGSTDKMVKLWDLSNNQPSCVASKNLKAGAVFSTS
FSEDCPFLLAVGGSKGDLQIWDTLTENEVARRFGKYSYRKPPPHE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgctatctcttgggtacccaagggaattgcaaaggttattccagctgaggtt
gatccacccactaaagaggaaattgatgagatactgagaagtggtaccttaaacagaagg
gaggactcggataatgaaaacgatggagaaatggatgttgatggtgctgctaaaggagtt
gcttatgaggctgctgccaaggtaaaacaacctagaagcggtactagttttggcataatg
aagaaatgtacgttggttgatgctgctaaaggagttgctgatgagatatcccaagcatta
gctgctgcagaggcacttgggagaaaacaacctggaagcagtactagttttggtactaaa
gatatgactgatgccctcaaggagcttgacatggagaattatgatgaagaggatgatggc
attgaaatatttagtactgcaattggggatagatactatccaagtaatgcgatggatcct
tatctgaagaaggatgatgaggatgaggatgatgatgaagaaattgaggatatgaccata
aaaccatcagatgctattattgtttgtgcgcgtaccgatgacgaagttagccaactccag
gtttgtgttctggaggagtcagaagatggtgaacttaacttctactctcatcatgatata
atcctttcggctcttcccctctgcactgcgcggatcgattgggacattaatggtggaggt
aaaggaaactatatagccgtaggcacattggatctagctatcgaaatttgggatctcaac
cttattgatgaaatccagccatttctggcactgggtggtgttgccaagaaaaaaaagaag
actgccaaatataagaaggggggtagtcatacagattctgtgcttggtcttgattggaac
aagaaactcaagtatcttgccagcgcaagcgctgacaagtctgtcaaggtttgggatttt
gagacagagaaatgtcgcacgacagtaaaccaccatactgacaaggttcaagctgttgca
tggaatgcccactcgccaaatttttttcttagtggatcgtttgatcgctcagtcatcttg
gtagacgagagaaatccttcacgtgtgtgtactaaatctatagttactgcagatgtagag
tgcttagcatggaacccacatgatcagcactcgtgtttggtcagtcttgaagatggtact
gttcaaggctttgatgtccgagttgcttcatctgaccctgctgctgcacgtttggagcca
actttcactcttcaggctcatgataagcctgttacctcgatttcgtattgtccaactgct
cctaagctactggctacaggctcgaccgataaaatggtgaaactctgggatttatcaaac
aatcagccgtcatgtgttgcatctaaaaatcttaaagctggagctgtattttcaacatcc
ttttctgaagattgtcctttcttgctagccgtaggaggctccaaaggagacctacaaata
tgggacacattaactgaaaacgaagttgctcgaagattcgggaaatacagttataggaaa
cctcctccacatgagtga
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