Papaver somniferum (opium poppy): 113318642
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Entry
113318642 CDS
T05758
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113318642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113318642
Spliceosome [BR:
psom03041
]
Complex C
Other components
Step II factors
113318642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
113318642
NCBI-ProteinID:
XP_026422619
LinkDB
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Position
10:40860599..40865276
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AA seq
538 aa
AA seq
DB search
MATASMAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKQDPNYTDKWYERGAKIFQADKYRKGACQNCGAMTHDAKSCMERPRKKGAIH
TNMYIAPDEKIETFELDYDGKRDRWNGYDTSTYARVVDRYEARDDARRNHLKEQQLKKLE
EKSNNQNDEAAAVAEVSDEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNL
RIREDTAKYLLNLDVNSSHYDPKTRSMREDPNPDTDPNEKFYGGDNQYRTSGQASEFKQL
TMHAWEASEKGQDMHMQAAPSQAEFLYKNFMISKDKLKTKTKDTIMEKYGNAATDEDVPR
ELLLGQSESQVEYDRAGRIIKGQEMAIPRSKYEEDIYPNNHTTVWGSWWKDHQWGYKCCK
QMIKNSYCLGIAGIEAAEEAIDHMKANIARKEATEEVPVAAEEKKLAPWGTDVPEDQVLD
PKRLNEALRKEDERKREERDERKRKYNVKWNDEVTAEDMEAYRMKRTHHDDPMKDFLN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcatcgatggcttttaagtccagggaggatcatcggaaacagttagaatta
gaagaagctcgtaaagctggtcttgcacccgctgaggttgatgaagatggaaaagaaatc
aatcctcatattccgcagtatatgtcatctgcaccttggtatctcaatgctgagagaccg
agtttgaaacatcaaaggaaatggaaacaagatccgaattacaccgataaatggtatgaa
aggggtgcaaagatatttcaggccgacaagtacaggaaaggcgcttgccaaaattgtggg
gctatgacacatgatgccaagtcatgcatggaaaggcctcggaagaagggagcaatacat
acaaacatgtatattgcgcctgatgaaaagattgaaacatttgaattggattatgatggc
aagagagaccgatggaacggatatgatacctcaacatatgctcgcgtcgtggacagatac
gaggccagagatgatgccagaagaaaccacctaaaagagcagcaactgaagaaattagag
gagaaaagcaataaccaaaatgatgaggctgcggcagtggccgaggtgagtgatgaggat
gaagatgatctgagagtagatgaagctaaggttgatgagagcaaacaaatggattttgct
aaggtggagaaacgtgtgagaaccactggtggtggaagcacaggaaccgtcaggaacttg
cgtattcgggaggatacagcgaaataccttttgaatctagacgtcaattcctctcactat
gatcccaaaactcgttctatgcgtgaggatcctaatccagacactgatcctaatgagaag
ttctatggaggtgataaccagtacagaaccagtggccaagcatcagagttcaagcagctc
actatgcatgcttgggaggcttccgagaaggggcaagatatgcacatgcaggctgctcct
tcccaagctgaatttctgtataaaaattttatgattagcaaggataagttgaagacgaaa
acaaaagataccatcatggagaagtacggtaatgcagcaactgatgaggacgttcctaga
gagcttctccttggacaaagtgagagtcaggtcgagtatgaccgtgctggtagaatcatc
aagggccaggagatggccattccaaggagcaagtatgaagaagacatctacccaaataac
catacgacagtttggggctcgtggtggaaagatcaccagtggggttacaagtgctgcaaa
cagatgattaagaacagctactgcttaggaattgcaggaattgaggcggctgaagaggca
attgatcatatgaaagccaatattgctcgcaaggaggctactgaagaagtacctgtagca
gcagaggagaagaagcttgctccttggggaactgatgtaccagaagatcaggttcttgat
ccaaaacggctgaacgaagccctcaggaaggaggatgaaaggaaaagggaagagcgggat
gaaagaaagcggaagtataatgttaaatggaatgatgaggtcactgctgaggatatggag
gcatataggatgaagaggacccatcatgacgatccaatgaaggattttctgaactag
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