Papaver somniferum (opium poppy): 113318653
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Entry
113318653 CDS
T05758
Name
(RefSeq) RNA polymerase sigma factor sigC-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113318653
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
113318653
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
JHY
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
113318653
NCBI-ProteinID:
XP_026422642
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Position
10:complement(151834324..151837579)
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AA seq
561 aa
AA seq
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MNFRLDLKWVSPIQSSIFTNSSTNRQQYPPSVRGKEVSCESARVCLISVSPDESESTLTR
DSFRVSACSSAAVQIVENSSIEREEMKLKTRKAPGIIMYDPFHSITTSVQDERSILNSSF
HTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRNLKTTTA
TTPAAATLNMSVPLPVIPEDSPVNGAANDEVGDVITVRSGRKEERISKRKRALENAAKLS
YLSPTMKRISKANFSSNKRSKGVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFK
SWAEAARIDERLLKERLHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMGV
LLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGIQLPPTLARAIYQIQKARKTLHS
LYGRYPDDNEIATFTGLSLAKIRLASKCPRIVGSIDQKLGDDINIKFMEFTPDRSVETPD
EVVMKQHMQKDVYKLLEDLDQREKQVLILRQGLWDGQCKSLEEIGKLFNVTKEWIRKIEK
SAYNKVRKEENLSNLSHYLDL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcagattagacttgaaatgggtttctccaattcagtcttctatattcaccaat
tcatcaacaaacagacaacaatacccaccttctgtaagaggcaaggaggtttcttgtgaa
tcggcaagggtgtgtctaatatctgttagtcctgatgaaagtgaaagtactctcactaga
gattcttttagggtctccgcgtgttcttcagcagctgtacaaattgtagaaaatagttca
atagaaagggaagaaatgaagttgaaaactaggaaagctcccgggataatcatgtacgat
ccatttcacagcatcacaacatctgtgcaagatgagagatctatacttaattcaagtttt
catacaaataaaacatcatatttcggtttactagtgaatagtcttgagaaagttgaagaa
atttttgtcgatgaggaactcataagattggagaaagatatcatggtccaattaggaagg
cttggagctctaaaattgttccatgcctgtctatccaggaaccttaaaacaaccacagca
acaacgccggcagcagcaactttaaatatgtccgtaccacttcccgtaattcctgaagat
tctccagtgaatggtgccgcgaatgatgaagtaggtgatgtaataactgttcgctctgga
agaaaggaggagagaatatcaaagaggaaaagagcattagaaaatgctgccaagctttct
tatttatcaccaactatgaaaagaattagtaaggctaatttttcgtctaacaaaagaagt
aaaggagttattgttgctaaaaacgaatcagaaatgtcaaggggtgtgaaggaggttgtg
aacttggaaagaattagaacgatgctcgaagaagaaactgggagggtggcaagctttaaa
agttgggcagaagcagccaggattgatgaaagattgttgaaggagcgtttgcattttggt
tggtattgcagagataaacttctgaagagcacgcgttcgttagttttgtttcttgcaaga
aactaccgtggagttggaatatcattagaagatctacttcaggcagggtatatgggtgtc
cttctaggcgcggagaggtacgatcataccaggggatacagattttctacctacgttcag
tactggatcagaaaatcaatgtcagcctacgttgcacaaaattctcgggggattcaacta
cctccgactctagctagagctatatatcagatacagaaagccagaaaaacccttcacagc
ctatatgggaggtatcctgatgataatgagattgctacatttacgggtctgtcattggcg
aaaattcgattggctagcaaatgtccaagaattgtaggctcaatcgatcagaaacttgga
gatgacataaatataaaatttatggaatttacaccagacagatcagtggaaacaccggac
gaggtagtgatgaagcaacatatgcagaaagatgtgtataaactattggaagacttggac
caaagagaaaaacaagtgttgattctaagacaagggctttgggatggtcaatgcaagtca
cttgaggagataggcaagctttttaatgttacaaaagagtggattagaaagatagaaaaa
tcagcttataacaaagtaagaaaagaggaaaatttatcaaatttaagccattatttggac
ttgtaa
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