Papaver somniferum (opium poppy): 113318689
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Entry
113318689 CDS
T05758
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113318689
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113318689
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
113318689
NCBI-ProteinID:
XP_026422694
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Position
1:230927407..230933307
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AA seq
412 aa
AA seq
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MPNIIILFSLKLVVFLTMFPLCANAATYNVLDFGAKPNNGTDSTKPFLQAWSLACRSVAP
ATMWIPRGTYLVNTIAFSGPCKSARVTVQIDGKIQAPPRNYWDIGNYGNWVLFQGIDGLT
INCGILDARGSQLWDCKRSGANCPQGVTSLTFNSIKNGIVSGIVSVDSQRAHMAINGCNN
MKVRKVILIAPDQSPNTDGIDIQSSTGVTIIDSSIRTGDDCIAIGPGTKNLLVQRVACGP
GHGISIGSLARNPNEAGVEGITVKDVTFTGSDNGLRIKTWPKPSDGFVKNVLYENIIMNN
VRNPIIIDQIYCPGTKGCSDQNSGVKITGVTYLNISGTSATPIAIRFHCSATTPCSGIKL
HNVNLTYSKQPAKAFCFSTLGTSSVGQLGASLSVGQLGTSLSVGRPSPGSCF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacataatcatcttattttctctaaagctcgtagttttcctcaccatgtttcca
ttatgcgctaacgcagctacttataatgttctagattttggggcaaaaccaaataatgga
acggattcgacgaaacctttcttacaagcatggagtttagcttgcaggtctgtagcacca
gcaacaatgtggatacctcgtggaacttatttggttaacacaatagcttttagtggtcct
tgtaaaagtgcaagagttacagttcaaattgatggtaaaattcaggcgcctcctaggaat
tattgggacattggtaattacggcaattgggttttattccaaggaatcgatggtttaacc
attaactgtgggattctggatgcacgcggatctcagttgtgggattgcaagagatctggt
gcaaattgtccacagggtgttacgtcgctgacgttcaacagtatcaaaaatgggatagtc
agcggtattgtatctgttgatagccaaagggctcatatggctatcaatggttgcaataat
atgaaggttaggaaggtgattcttattgcacctgatcaaagtcctaacacagatggtata
gacatacaatcatcaactggtgtaacaatcattgattcaagtatcagaacaggtgatgat
tgtattgcaattggtcctgggaccaaaaatctactggttcaacgcgtagcatgtggccct
ggacacggaattagtattggaagtttggccagaaatccgaatgaagcaggggtggaagga
attacagttaaggatgtaaccttcacaggatcagataatggattacggatcaaaacatgg
ccgaagccaagtgatggttttgtaaagaacgttctttatgagaatatcattatgaataat
gttcggaaccctatcattatcgatcagatttattgccccggtaccaagggctgctctgac
cagaattctggagtcaagattactggggtgacatacttaaatataagtggaacatctgca
acaccaattgccattagatttcattgtagtgcaactaccccgtgcagcggaatcaaatta
cacaatgttaatctcacttattcaaaacaacctgccaaggccttttgtttcagcaccctt
ggaacatcttcagtgggacaacttggagcgtccttatcagtaggacaactcggaacatcg
ttatcagtaggacgaccttctcctggaagttgtttctag
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