Papaver somniferum (opium poppy): 113319023
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Entry
113319023 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113319023
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113319023
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
113319023
NCBI-ProteinID:
XP_026423113
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Position
10:166043910..166047956
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AA seq
742 aa
AA seq
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MMSSVKTSCTSTLGYLLLLILINNYAWNTSALSNLEDGVKLYVQDSQVVMDNGLVQVNIS
NPLGFVTGVQYNGTDNLLEIDNEDHNRGYWDLHWSQRGTRGSQLLMHGTSFKVIVQNETQ
VEISFSRTWNSSASSSPSHQSDSNNSTDWDPLNFDIRYVMLKGSSGFYTYGIYEHLNGFP
DFNLNGTRVVFKLRKDKFQYLAISKTRQRRMPLPEDRVPPRGKVLQYKEATLLVDPVEPE
LKGQVDDKYMYALNSEDIEVHGWVSSVASDPSVGFWHITPSDEYRGGGPLKQELTSHVGP
TSLTVFLSSHYMGQDKIPMFGNGEPWKKVHGPVFIYLNSAPPGTNESALWDDANEQLQQE
AQKWPYNFLASTDYPKSDQRGTVNGRILVRDRFVSKKDIPAVDAYVGLALPGEVGSWQTE
CKGYQFWTRAGLDGSFTIKNVHSGDYNLYAWVPGFIGDYKYGNLITVKAGMYIYNNFYSF
NYFSFALVYPFVIKTGDSIELDDDLVYEPPRNGTTLWEIGIPDRTAAEFFVPDVDPKYAN
PLYLSQDRFRQYGLWEQYSVLYPSTDLVYTVNSSTYQKDWFYAQVTRKLGEKVYNSTTWQ
IKFDLDSVDQGTIYKLRVALASTHGAKLQIRLNNLNTEIPHFTTGGMRKDNAIARHGIHG
LYLLFNVDVKSDWLKDGENTIFLSQVKGEGPFQGIMYDYIRFEAPAKDERTEGRTNAEAR
LYFCTTKCLINVFISCLLIFLM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatctgtgaaaacttcttgtacatccacgttaggctacttgttattgttaatt
ctaatcaacaattacgcatggaacacatcagctttgagcaatcttgaagacggtgtaaaa
ttgtatgtacaagacagccaggtggtgatggataatgggttagttcaagtaaatatatcc
aatcctttaggattcgtcactggagttcagtataacggtaccgacaacttgttagaaatc
gacaatgaagaccataatagagggtactgggatctgcactggagccaaaggggaaccaga
ggatcacaacttttgatgcatggaactagttttaaggttatagttcaaaatgaaactcaa
gttgaaatttcgttctcaagaacatggaattcctcggcttcatcatctccgtcacatcag
tcagactcaaacaacagcacagattgggatcccctcaactttgacataagatatgtaatg
ttaaaaggttcgtcaggattctatacgtatggcatctatgagcacctaaatggattccca
gatttcaacctcaatggaactagggtcgtcttcaagcttcgtaaagacaagtttcaatat
ctagctataagtaagacacggcaaagacgaatgccactgccagaggatcgtgtaccacca
agaggaaaagtacttcaatacaaagaagcaactcttcttgttgaccctgttgaaccagaa
ctaaaaggccaagtggatgacaagtacatgtatgcactaaatagtgaagacatagaggtt
cacgggtgggttagctctgtggcctctgacccttcagtaggtttttggcatatcacacca
agcgatgaatatcgaggtggtggtcctctaaagcaggaactcacctcacatgttggtcct
acatctctcactgtgttccttagttcccactatatgggccaggataagatacccatgttt
ggaaatggagaaccttggaaaaaagtgcatggtccggtgttcatatatcttaattcagct
ccacccggtacaaatgaaagcgcattgtgggacgatgccaatgaacagctgcaacaagaa
gcccagaaatggccgtataatttcctagcttccaccgactatccaaaatctgatcaaaga
ggcacagtcaatggaagaatactcgtccgtgataggtttgtaagcaagaaagatatacct
gcagtagatgcttacgttgggttagctttacccggagaagttgggtcctggcagacggag
tgcaaggggtaccaattttggactagagctggtcttgatggttcattcacaattaagaat
gtacattctggagattacaatctatatgcatgggttcctgggttcataggagattacaag
tatggaaatctcattacggttaaagcaggtatgtatatatataacaatttctattctttt
aattacttcagttttgcgctggtttatccattcgttattaaaacaggagattccattgaa
ttggatgatgatcttgtttatgagcctccaagaaatggtactacattgtgggagataggt
attcctgacagaaccgcagcagagtttttcgtcccagatgttgaccctaaatacgctaat
ccactatacttatcgcaagacagatttagacaatatggattgtgggagcagtatagtgtt
ttatatccaagcacagaccttgtttacacagtaaacagcagcacttaccagaaagattgg
ttctacgcgcaggttacccggaagttgggagaaaaagtgtacaactcaacaacatggcag
attaagttcgacctagatagtgttgatcagggtacgatttataagttgcgagtggcactc
gcatccacacatggagcaaagttgcagattcgactcaacaatttgaatacagagatccct
catttcacaactggaggaatgcgcaaggataatgccattgcgagacatggaattcatggc
ctgtatctgttgttcaatgttgatgtaaagagtgattggctcaaagatggcgaaaatacc
atttttctttcacaggttaaaggtgaaggcccgtttcaaggtataatgtatgactatata
cgtttcgaagcaccagcaaaggacgaaagaacagagggaagaacaaatgcggaagctagg
ctatatttctgcacaacaaaatgcctgattaatgttttcatctcctgtcttttaatattc
cttatgtaa
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