Papaver somniferum (opium poppy): 113319063
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Entry
113319063 CDS
T05758
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113319063
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113319063
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113319063
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
Helicase_C
DEXQc_Suv3
IstB_IS21
RNA_pol_3_Rpc31
AAA_22
Motif
Other DBs
NCBI-GeneID:
113319063
NCBI-ProteinID:
XP_026423147
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All DBs
Position
10:complement(31743309..31749737)
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AA seq
1173 aa
AA seq
DB search
MEILSPLCSTPPLCISISSKPIFNFFPTPSYQNLGFARTRVLTLKISSTKLYSFRKRSNF
SIEGRVSDVEEEEEEEDEDEDDDVAAEEYEEFIVDADREEDEEEEESDSVIVSSSSSSRY
EEHKWQRVERLCNDVKELGEGIIDYNELSSIYDFRVDKFQRLAIQAFLRGSSVVVSAPTS
SGKTLIAEAASVATIARGRRILYTTPLKALSNQKFRDFRDTFGESNVGLLTGDSAVNKDA
PILIMTTEILRNMLYQSVGTDSSGSGLFHVDAIVLDEVHYLSDIYRGTVWEEIVIYSPKE
VQLICLSATVANADELAGWIEQIHGKTELVTSTKRPVPLTWHFSTKKSLSPLLNEKGTTM
NRKLSLNYLQLSAAGVKPFKEDGYRGRNSRRRESDRRYNSASDVSGQSALSKNDINSIRR
SQVPQVRDTLWHLRARDMLPAVWFIFSRKGCDVAVQYVEDCKLLDECEMAEVDLALKKFR
IQYPDAIRESSVKGLRQGVAAHHAGCLPLWKSFIEELFQRGLIKVIFATETLAAGINMPA
RTAVISSLSKRCETGRIQLSPNELLQMAGRAGRRGIDEKGHVVLLQGTNEGAEEGCKVLF
SGLEPLVSQFTASYGMVLNLLSGARVTRRSKETDETKVFRAERTLDEARKIIEQSFGNYV
GSNVMIAAQEELAKIEKEIDFLTLEVTDAAIDEKSRKQMSAKAYKEIHALQEELRAEKRL
RTKLRREMEIQRMAALKPILKELEDGQLPFLCLQHKDSEGFMHLVPAVYLGEVDSLSSSK
VKNMIDADDSFELNTVDNELEVGDSDRQLDAQLSYYVALGSDNSWYLFTQKSIKTVYSTG
FPNAPLAEGDASPREIMQSLLDKEEIDWEKLSESEFGGLWRKEGSLETWSWSLNVPVLSS
LSEDDEVLERSQVFHDALERYTKQRTTVSRLKKKISRSEGFKEYKKIIDVTNFTKEKIER
LRARSIRLTNRIEQIEPSGWKEFLQISNVIHEARALDKNTHVIFPLGETAAAIRGENELW
LAMVLRNKILLDLKPAQLAAVCGSLVSEGIKLRPWKNNSYVYEPSATVLNLIKLLDEQRS
SVLQLQEKHGVKISCALDSQFAGIIEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLV
QIPKLPDIDPVLQKNALAASNVMDRPPISELAG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggagattctttctccactttgttcgacccctcctctttgtatatccatatcttcaaaa
cccatcttcaatttcttcccaaccccatcttatcaaaacctagggtttgccagaacaaga
gtcctgacattgaagataagttcgacaaaattgtatagctttagaaaaaggtctaatttt
tcaatagaggggcgagtatctgatgttgaagaagaggaggaggaggaggatgaggatgaa
gatgatgatgttgctgcagaggaatatgaagaattcattgttgatgcggatagagaagaa
gatgaggaagaagaagaaagtgattcagtaattgtatcttcttcttcgtcatcgagatat
gaagaacataaatggcaaagagtagagagactttgtaacgatgttaaagaattaggtgaa
gggattattgattacaatgaactctcttctatttacgactttcgtgtcgataaatttcag
agattggctatacaagcatttttaagaggttcatcagttgtagtttctgctccaactagt
agtgggaagacattgatagctgaagctgcatctgtagctacgattgcgaggggaaggcga
atattgtatacaaccccattgaaggcattgtctaatcagaagtttagagattttcgtgat
acgtttggtgaaagtaatgttggtctacttaccggagattctgcagttaacaaagacgca
cccatattgattatgacaacagaaattctacggaatatgttgtatcagagtgttgggacc
gattcttctggtagtggattatttcacgtcgatgcaattgttttggatgaagttcattat
ctcagtgacatctacaggggtacagtttgggaagaaatagtgatttattctcctaaagaa
gtgcagcttatatgcctttcggccacagttgccaatgctgatgaactggctggttggatt
gagcagattcatggtaaaacagagctggtaacatctactaaacgaccagttccattgact
tggcatttctctacaaaaaaatctttgtcacctcttcttaatgagaaaggaactaccatg
aacaggaaattatcactcaattatctacaactttctgctgcgggagttaaacctttcaag
gaagatggatatagaggcaggaactcaagaaggcgagaaagtgaccggcgctataatagt
gcttcggatgtatctggacagtcggcactctctaaaaatgacataaacagcattcgccgg
tcacaggttccacaggttagagacacattatggcaccttcgggcaagggatatgctgcca
gctgtttggtttatttttagtaggaaagggtgtgatgtagctgttcagtatgttgaagac
tgcaagcttttagatgagtgtgagatggctgaagttgatctagcattgaagaagtttcgc
attcaatatcctgatgccatcagagagtcttctgtgaaaggtctgaggcaaggggttgca
gcacatcatgctggttgcttacccctgtggaagtcatttattgaagagttgtttcagaga
ggactgattaaggttattttcgcgacggaaacacttgctgctgggatcaatatgccagct
agaacagctgttatttcttctcttagcaaaagatgtgaaactggacgtatccagttaagt
ccaaatgaacttcttcagatggctggtcgagctggccgtagaggtatcgatgaaaagggt
catgttgtccttcttcaaggtaccaatgaaggagctgaagaaggctgcaaggttctcttt
tctggactagagcctcttgtgtcgcagtttactgcttcgtatggaatggtgctaaacctc
ctctctggtgcaagagtaactcgtagatcgaaggagacagatgaaacaaaagtctttcga
gcagagcggacattggatgaagctaggaagatcattgaacaaagtttcgggaattatgtt
ggaagcaatgtcatgattgctgcccaagaagagctcgccaaaatagaaaaagagatcgac
ttcttaactcttgaagttactgatgctgctattgatgaaaaaagccgaaaacagatgtct
gcgaaggcatataaggagatacatgcattgcaggaagaattacgggcagaaaaacgactt
cggacgaagctgcgacgagagatggaaatacaaagaatggccgctctgaagcctatattg
aaggagttggaagatgggcagttaccttttctatgcttgcaacacaaggatagtgaaggg
tttatgcatttagtccctgctgtttatttgggcgaggttgattcactctctagctctaaa
gtcaagaacatgattgatgcagatgactcttttgaactaaacactgtggataatgagttg
gaggttggagatagtgacagacaacttgatgcccagttgtcctattacgtggctcttggt
tcagataattcctggtatctcttcacacagaagtcgattaagacagtttatagcacgggc
tttcccaatgctcctctagctgagggtgatgcttcgcctcgagaaattatgcagtcgcta
cttgataaggaagaaattgactgggaaaagctgtctgagtctgaatttggaggtctttgg
cgtaaggaaggatctcttgaaacatggtcttggagtttgaatgtgccagtcttgagtagc
ctttcagaagatgatgaggtgctagaaaggtcacaagtgttccatgatgctcttgaacgt
tacacgaagcaaagaactacggtgtctcgtttgaagaaaaaaatctcgcgtagtgaaggc
ttcaaagaatataagaagatcattgacgtgaccaactttaccaaggaaaagattgaacga
ctaagggctcgatcaattcgcttaactaatagaatagagcaaattgaaccatctgggtgg
aaggagtttttgcagatcagcaatgtcatacatgaagcaagagctttggataaaaataca
cacgtgatatttccacttggtgaaacagcggcagccattcgaggagaaaatgaactctgg
ctagctatggtgctccggaataaaatattattagatttaaagccagctcaattagctgct
gtctgtggaagtctagtttccgaaggaattaaacttcgtccatggaaaaataatagctac
gtatatgagccgtccgctactgtattaaacttgatcaagcttctggatgagcaaagaagt
tcggttcttcagctccaagaaaaacatggtgtaaagatttcttgtgcattggatagtcaa
tttgctggaatcatcgaagcttgggcctctggcttaacttggcgagaaattatgatggat
tgtgcaatggatgacggggatttagctcgtctattaagacggacaatcgatttattggtt
cagattcctaagttgcctgatattgacccagttctgcaaaaaaatgcgttggccgcatct
aatgtcatggaccgacctccaataagcgagcttgctggttag
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