Papaver somniferum (opium poppy): 113320198
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Entry
113320198 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113320198
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113320198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113320198
03019 Messenger RNA biogenesis [BR:
psom03019
]
113320198
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113320198
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113320198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
113320198
NCBI-ProteinID:
XP_026423920
LinkDB
All DBs
Position
11:55978268..55982040
Genome browser
AA seq
519 aa
AA seq
DB search
MFPFQPPFPHLPNQIQMGGSNFSTPQQVMPSNQGVTNQSNFSNGFNPGVVAPYGIFSAMP
NAHFLNVANPHPQMQNSHVGRPFPGSGPHNMNSVMTSPQCGNSQNFPQNTSQQGPLFMQN
HNRPPFQSYPQAVMFNPYSQPMAMNQPTGYPQSQFVQMPVNPSQGLPHSAHPCPNPLWGN
QQMGFINSSGVASQNAQGLHSFNPIPAAQNTSQKISQGNKTNDGGKDASNISQKSFHNKK
FTKNHQESGRGELPNSRFQKSKFQARENAKGNFKSNKGKGGKGPQNAGPGKSLLDNSVKH
GSEEPKRFPRPNYSEREIQQWREERKKNHPLRSNAEKKLADKRSEEAKRRRQQLKGILAK
QAELGCDIAELPPNYLTDSEKEGRFQNKHNKRGRRGKQNRFSKKQKAGNGEDSVAQPDMC
REPTLLQKLLSADIKRDRSHLLQVFRFMVTNSFFKDWPDTRLEFPLITIKEGESKGEISE
EISSPILDHSNSILQGDEEDEDNDETKEESDTEEGELTE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttttcaacccccctttccccatcttcccaaccaaatacaaatgggaggaagt
aacttctcaactccacaacaggtcatgccatccaatcaaggtgtcacaaaccaatcaaat
ttttctaatggcttcaatcctggagttgtggctccgtatggaatcttttctgccatgcct
aatgcccactttctgaatgtcgctaaccctcatccacaaatgcagaatagccatgttggg
agaccttttcctggttctggtcctcataatatgaattctgtcatgacatctccacaatgt
gggaattctcaaaactttccgcagaatacgagtcagcaagggccattgtttatgcaaaat
cacaatagaccaccctttcagtcatatccacaggcagtaatgtttaatccatacagtcag
cctatggccatgaaccaacctactggttatccacagagtcagtttgtacaaatgcctgtc
aatccttctcaaggtctgcctcatagtgcacatccatgtccaaatcccttgtgggggaac
caacaaatgggcttcataaattccagtggagttgcatcgcagaatgcacaaggtctgcat
tcgtttaacccaatcccagcagctcagaatacatctcaaaaaatttcacaggggaacaaa
actaatgatggtggaaaagatgcctcaaacatcagccagaaaagctttcacaacaaaaaa
tttacaaagaatcaccaggaatctggtagaggagaattaccaaattcaagatttcaaaaa
tccaagtttcaagccagggaaaatgccaagggaaatttcaagtccaataagggaaaggga
ggaaaaggtccacaaaatgctggtcctggaaaatctctactggataattctgtcaagcat
ggtagcgaggaacctaaaagatttccccgtccaaattattcagaacgagaaatccagcaa
tggcgtgaagaaagaaagaagaaccatcctctgaggtccaatgcggagaagaagttggct
gataaacgctctgaagaggcgaaaaggcggcgtcagcaacttaaggggatccttgcgaag
caggccgagttaggttgtgatattgctgaattaccgccaaattatttaacagactctgaa
aaggaaggaaggtttcaaaacaagcacaacaaaaggggaagacgtggcaagcaaaaccga
ttctccaaaaagcagaaggcggggaacggagaagattcagttgcacagcctgatatgtgc
agggagccaacccttcttcagaaacttctgagtgcagatattaagagagataggagccat
cttctgcaagttttcaggtttatggtgacaaattctttcttcaaagactggccagacacg
cgattagagtttcctttgatcaccattaaagaaggagagagtaaaggtgagatcagtgaa
gagatatcttctccaattctggatcatagtaattctatattacaaggtgatgaagaagat
gaggataatgacgagacgaaggaggaatctgacactgaagagggcgaactcacagagtag
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