Papaver somniferum (opium poppy): 113320507
Help
Entry
113320507 CDS
T05758
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03030
DNA replication
psom03410
Base excision repair
psom03420
Nucleotide excision repair
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113320507
03410 Base excision repair
113320507
03420 Nucleotide excision repair
113320507
03430 Mismatch repair
113320507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113320507
03036 Chromosome and associated proteins [BR:
psom03036
]
113320507
03400 DNA repair and recombination proteins [BR:
psom03400
]
113320507
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113320507
DNA Replication Termination Factors
ELG1-RFC complex
113320507
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113320507
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113320507
Check point factors
HRAD17(Rad24)-RFC complex
113320507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA
Sigma54_activ_2
RuvB_N
RsgA_GTPase
AAA_2
AAA_5
Mg_chelatase
DUF815
CesT_Tir_1
AAA_22
ABC_tran
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113320507
NCBI-ProteinID:
XP_026424201
LinkDB
All DBs
Position
11:36349381..36353451
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKMIVHADVAQNLKKLVTEQDCPHLLFCGPSGNGKKTLIMAVLRQMFG
PGAEKVKVETKTWKVDAGSRTIDVELTTLSGTHHVEMNPSDANFQDRYVVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYIASCRLILCCNSSSKVTEAVRSR
CLNVRINAPTEEQIVSVLEFIGKKEGLQIPPGFTGRIAAQSNRSLRRAILLFETCRVQQY
PFTSNQAIPPMDWEQYITEIASDILQEQSPKRLFVVRGKLYELLINCIPPVLILKRLLFE
LLKKLDAELKHEVCYWAAYYEHRMRLGQKAIFHMEAFVAKFMSIYKAFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaagtacagaccgaaaaccctagataaaatgattgttcatgcagat
gtagctcaaaatctcaagaaactggttaccgagcaggattgtccccatttgttgttctgt
ggaccttctggtaatggtaagaaaaccctaatcatggccgtactcagacagatgtttggt
cctggtgcagaaaaggtgaaggtagagaccaagacatggaaagttgatgctgggtccaga
acgattgatgtagaactcacaacattgtctggtacccatcatgtggaaatgaaccccagt
gatgcaaacttccaggatcgatatgtcgtgcaagagattattaaggagatggcaaagaat
agaccaattgacacaaaagggaagaaggggtataaagtcttagtgctaaatgaggttgac
aaactctcaagagaagcccagcattcactacggagaaccatggagaagtatattgcatcg
tgtcggttaattctttgctgtaatagttcatcaaaagttactgaagcagttcgttctcga
tgtttgaatgttcgaataaatgcaccaactgaagagcagattgtttcggtgttagaattc
attggcaaaaaggaaggactgcaaattccgcctggatttacgggtcgtattgctgctcaa
tcaaatcggagtttaagaagggccatattgttatttgagacatgtcgagttcaacagtat
ccttttacaagtaatcaagctatcccaccaatggattgggaacaatatataactgaaata
gcatctgacattttgcaggagcagagccctaaaaggttgtttgtggttcgagggaagttg
tatgagctactaataaattgcattcctcccgttcttattctgaagaggctgttatttgag
ctgttaaagaagctggatgctgaattgaagcacgaggtctgctattgggctgcatattat
gagcataggatgcgtcttgggcagaaagccatatttcacatggaagcttttgtggccaaa
ttcatgagcatttacaaggcgtttctcatctccacatttggttaa
DBGET
integrated database retrieval system
