Papaver somniferum (opium poppy): 113320537
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Entry
113320537 CDS
T05758
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113320537
03036 Chromosome and associated proteins [BR:
psom03036
]
113320537
Transcription factors [BR:
psom03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113320537
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113320537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
HMG_box
Rttp106-like_middle
SSrecog
HMG_box_2
HMG_WDHD1
Hid1
Motif
Other DBs
NCBI-GeneID:
113320537
NCBI-ProteinID:
XP_026424225
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All DBs
Position
11:complement(138255896..138257969)
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AA seq
626 aa
AA seq
DB search
MTDGKEYNNILLGGRGGTKSGQLRVNPGGIAWKKQGGGKLIEFHKSDIVGLTWMKIPRTY
QLGIRSKDGAFYKFTGFRDQDVSNLTTYIQTSIGLTPVEKQLSVSGKNWGDIELDGSMLT
FKVGSKQGFEVSLADVSLIQMQGKNDVMLQFHEDDNVVANEKDSLVDMSFHIPDSNVQYV
GDENRPPAQVFRDRIMSMGDLGPGEEPVVTFEGISILTPRGRYNVELHASFLRLQAQAND
FKIQYSSIWRLFLLPKSNQPHTFVVVTLDTPIRKGQTLYPHVVLQLETESVVESTLSLGE
DALKTKYQGKLEPSYKGLIHEVFTKILRGLSGGSIKITRPGSFRSCQDGYAVKSSLKAED
GVLYPLEKGFFFLPKPPTLILHDEIEFVEFEMHAAAGTSMQYFDLLVKLKNEQEHLFCNI
QRNEYHNLSEYITSKGLKIMKQGNSRAMKDAERFKNEIDESDDETDDDFKIDRESDGGSP
TDDSGGEESDASLSGDVKQKPAKKESRKEASTSKPASSKRKSTKDGVEDGGRKKKAKKKR
DPNAPKKATSSFMFFSNAERENIKKSNPGISFTDIARTLGEHWKKMTAEEKEPYEAMAAA
DRERYQKAMAAYKGDVPASIVGSDSE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgggaaagaatacaataacattcttcttggtggtcgcggcggcacgaaatct
gggcaacttagggttaatccaggaggtattgcatggaagaagcaaggtggaggtaaattg
attgaattccacaaatctgacattgtaggtctgacatggatgaaaatacctagaacatat
cagctaggtattcgatcaaaggatggtgcgttctacaagttcacaggtttccgggatcag
gatgtaagtaacttaaccacatatattcaaaccagtattggattaactccggtggagaag
cagctttctgtcagcggaaagaattggggagatatcgagttagatgggagtatgctaact
ttcaaagtaggttcgaagcaagggtttgaagtttcattagcagatgtttcgctgatccag
atgcaaggaaagaatgatgttatgttgcaatttcatgaggatgataatgttgttgctaat
gagaaagattcactggttgacatgagttttcatatacccgattccaatgtgcaatatgtt
ggtgatgaaaatcgtcctccagcgcaagttttccgtgacagaatcatgtcaatgggggat
cttggacctggcgaagaacctgttgtcacgtttgaggggatttctattcttactcctagg
ggtcggtacaatgttgaactgcatgcttcgtttttacggctccaggcacaggccaacgat
tttaagattcagtatagcagtatttggcgtttgtttcttctacccaagtccaatcaacca
catacttttgttgttgttacgcttgacacaccgatccgaaaagggcaaaccttgtatccg
catgttgtgttgcagttggaaacagaatctgtggttgaaagtacattgtcactgggcgag
gatgctttgaagactaagtaccagggcaagttggaaccatcgtataagggtctcattcat
gaagttttcactaaaattttacgtggtttatctggcggcagcatcaaaattactaggccg
gggagtttccgcagttgtcaagatggatatgctgtcaagtcatccttgaaagctgaagat
ggtgtgttgtatcctcttgaaaagggtttcttctttttacctaaacctcctaccctcatt
ctccacgacgagattgaatttgtggagtttgagatgcatgctgctgcaggcacaagtatg
caatattttgatcttcttgtcaaattgaaaaacgagcaggagcatctcttttgcaacatt
caaaggaatgaatatcataacctctctgagtacattactagcaagggtttgaaaatcatg
aaacaggggaatagccgagctatgaaagatgctgagcggtttaagaatgaaattgatgag
agtgacgatgaaactgatgatgatttcaaaatcgatagagagagtgatggaggctctcca
actgatgattctggaggagaggaatctgatgcaagtttaagtggagatgtgaaacagaag
cctgcaaagaaagaatccagaaaagaagcttcgacttccaaaccagcctcaagtaagagg
aaatctacaaaagatggagttgaagatggtgggagaaagaagaaagcaaagaaaaaaagg
gatccaaatgcaccaaagaaggctacgtccagtttcatgtttttctcgaatgctgagaga
gaaaacataaagaaaagtaaccctgggatatcatttactgatatcgcaagaacacttgga
gagcattggaagaaaatgacggctgaggagaaagaaccgtatgaagcaatggctgcggct
gatcgggaacgttaccagaaagccatggctgcatataaaggtgatgtgccagcatcaatt
gttggttctgatagtgagtag
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