Papaver somniferum (opium poppy): 113320592
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Entry
113320592 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04141
Protein processing in endoplasmic reticulum
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113320592
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113320592
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113320592
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113320592
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113320592
03009 Ribosome biogenesis [BR:
psom03009
]
113320592
03110 Chaperones and folding catalysts [BR:
psom03110
]
113320592
04131 Membrane trafficking [BR:
psom04131
]
113320592
03051 Proteasome [BR:
psom03051
]
113320592
03029 Mitochondrial biogenesis [BR:
psom03029
]
113320592
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113320592
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113320592
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113320592
Complex C
Prp19-CDC5 complex
113320592
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113320592
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP70 / DNAK
113320592
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113320592
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113320592
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113320592
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113320592
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113320592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Phasin
FGGY_C
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
113320592
NCBI-ProteinID:
XP_026424284
LinkDB
All DBs
Position
1:complement(238206221..238210576)
Genome browser
AA seq
615 aa
AA seq
DB search
MAEKVAGEAAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAK
NQAAANPINTVFDVKRLIGRKIGDSTVQSDMKLWPFKVIAGKGEKPMVQVNYKGKDVEFS
AEEVSSMVLVKMREIAETYLGSSVKNAVVTVPAYFSDSQRQATKDAGAIAGLNVMRIINE
PTAAAIAYGLDKKAGNAGAKNVLIFDLGGGTFDVSILTIEEGMFEVKATAGDTHLGGEDF
DNRMVNFFVQEFKKKHKKDISENPRALRRLRTSCERAKRTLSSTTQTTIEIDSFYEDIDF
HTSVTRAKFEQLNMDLFQKCMEPVQKCLKDAEMDKKTIQEIVLVGGSTRIPKVQSLLQDY
FNGKELCKNINPDEAVAYGAAVQAAILSGESNEKVQDLVLLDVTPLSLGIETVGGVMNVV
IPRNTSIPNRKQKNDFTTTENGQTVVKIRVYEGERAKTSENNLLGKFKLEGIPPQPRGTP
KISVLFDIDSNGILNVSAKDTTSGSSSKITITNSKGRLSKEEIEKLVQEAEKYQAEDEEH
KKKVESRNAFENYIYDVRNAVEGAEGKIATKAKKKIEEAISDAFEWLDINQVADVAQVQA
KQEKLESLCDLYLNN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaaggtagcaggagaagcagcaatagggatagatttaggaacaacctattca
tgtgttggagtatggcagaatgaccgtgttgaaatcatagctaacgatcaagggaacaga
actacaccttcttatgttgcttttactgatactgaacgtttgattggtgatgctgctaag
aatcaagctgccgcaaaccctatcaacaccgtttttgatgtgaaacgtttgattggtagg
aagatcggcgatagcactgttcagagtgatatgaagctttggcctttcaaggttattgct
ggcaaaggcgagaaacccatggttcaagtcaattacaaaggaaaagatgtagagttttca
gctgaagaagtctcttccatggttctcgtaaagatgcgagaaattgctgaaacttatctt
ggttcaagtgttaagaatgctgttgttacagtccctgcttacttcagtgattcacagcga
caagctaccaaggatgctggagccattgctggccttaatgtaatgcgcatcattaatgaa
cctacagctgctgccattgcatacggtcttgataagaaggctggtaatgctggtgcaaaa
aatgttcttatctttgatcttggtgggggtacttttgatgtttcgatactcaccatcgag
gagggtatgtttgaagtcaaggctacagctggggatacccatctcggaggagaggacttt
gataacaggatggttaatttcttcgttcaagagttcaagaagaagcataaaaaggacatc
agtgagaacccaagggctctcaggaggttgagaacatcatgtgagagggcaaagaggact
ctctcatccacaactcagacaaccattgagattgattctttctatgaagatattgatttt
catacatcagtcactcgcgctaaattcgaacaattgaacatggatctattccagaaatgt
atggaacctgttcagaagtgtttgaaggatgctgaaatggacaagaagacaatccaggaa
attgtgctcgtaggtggatccactagaattcccaaggttcagtctctattgcaggattat
tttaatgggaaggaactctgcaagaacatcaaccctgatgaagctgtggcttatggtgct
gcagtgcaagctgctatactgagtggcgagagtaatgagaaggtgcaggacctggtgtta
cttgatgtcacccctctttctcttggtatcgaaacagttggaggtgttatgaatgtggtt
attcctaggaacaccagcattcccaacaggaagcaaaagaacgacttcactacaactgag
aatggacaaacggttgtgaagattcgggtgtatgagggtgagagagctaaaaccagcgaa
aacaacttgttgggcaagttcaagttagaaggaattcctccacaacctcgtggtactcca
aagatctctgtactttttgatatcgattcaaacggtatactgaatgtatctgccaaggac
actacaagtgggagctcaagtaagatcaccattacaaacagcaagggaaggttgtccaag
gaagagattgagaagttggttcaggaagctgagaaataccaagccgaagatgaagaacac
aagaagaaagtggagtctaggaatgcctttgaaaactacatatacgacgtaaggaacgca
gtcgaaggtgcagaagggaagatagcaacaaaagctaagaagaagatcgaagaggcaatt
agtgacgcatttgagtggttggatatcaatcaggttgctgacgtagcccaggtccaggca
aagcaggagaagctggagagcctatgtgatctttatcttaataactaa
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