Papaver somniferum (opium poppy): 113321207
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Entry
113321207 CDS
T05758
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113321207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113321207
03009 Ribosome biogenesis [BR:
psom03009
]
113321207
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113321207
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113321207
Complex B
113321207
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113321207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
113321207
NCBI-ProteinID:
XP_026424871
LinkDB
All DBs
Position
11:120619281..120623997
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AA seq
346 aa
AA seq
DB search
MNLPFQWGDRHGRFPYFHGVAGEDRIIIESYPTMDRLDINKVCLYSYDWKKKTSTKKAKD
GVVSELSSVSLYSGLAFVSLFRSFAESLWPVRDHQFRHRQKTEKARLRLNVNVTAALDSA
PAPAPIESFTNMCLHESIMKDISFHKYSTPTSIQAQAMPVALNGRDLLCCAETGSGKTAA
FAIPMIQHSVRRGDGPLALVLAPTREHAQQIEKEVKAFSRSLESFRTATVVGGTNMAEQK
SELRAGVNIVVATPERLIDHLQQGNTCLSRISFVVMDEADILLDMGFEPQIREVMRNVPI
KRQTLLFSATMPVEIEALAQKYLSDPVQVKVGKVQESEKVNMEDLH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaccttttcagtggggcgacaggcatggtagattcccttacttccatggtgtt
gcaggagaagaccggattattatagaatcctacccaactatggacagattagatataaac
aaagtctgtctatattcttatgattggaaaaagaagacgtcaacaaaaaaggccaaagat
ggtgtggtttcggagttaagttcggtttccttatattcgggattagcttttgtttcctta
tttagatcttttgcagaaagcctctggcctgttcgagaccaccaattcagacaccgccaa
aaaactgaaaaggctcgtttgcggctaaatgttaatgttactgctgcactggattctgct
cctgcacctgctccaattgaatcttttacgaatatgtgtctgcatgaaagtatcatgaaa
gatatatcgttccacaagtactctacaccgacatctatccaggcccaagctatgccagtt
gctcttaatggaagggatcttttgtgttgtgcagagactgggagtggtaaaactgctgct
ttcgctattccaatgattcagcattctgttcggcgaggtgatggtcctcttgcgttagtg
ttggcacctacgagagaacatgcccaacagatagagaaagaggttaaggccttcagtaga
tctctggagtccttcagaactgctactgttgtgggtggaacaaatatggcagagcagaag
tctgagttgcgagcgggagtaaatattgtggttgccacacctgaaagacttattgaccat
ttgcaacaagggaacacctgcctctctaggatctcatttgttgttatggatgaggctgac
atactgttggacatggggtttgagccgcagataagagaggtgatgcggaatgttcccata
aaacgccaaacgttgctgtttagtgcaacaatgccagtagaaattgaagcccttgcgcag
aagtaccttagtgacccagtgcaagtgaaggttggaaaggttcaggagagtgagaaggtt
aatatggaggacttgcattaa
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