Papaver somniferum (opium poppy): 113321388
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Entry
113321388 CDS
T05758
Name
(RefSeq) uncharacterized protein At3g06530-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113321388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113321388
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113321388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
113321388
NCBI-ProteinID:
XP_026425082
LinkDB
All DBs
Position
1:240169919..240182268
Genome browser
AA seq
2153 aa
AA seq
DB search
MATTLEAQLRIIKSLNNLEIKSTKKPFTNPSILYDPRVAADLDIDSLYSIAISSLDVLVK
SELRFEAYKNSLFSYKSRELNRALQGRVENEEIDVSISSYLRLLSGYLLVDSALHTLEYL
VRRYMVHVYNIDELVNCALPYHDTAAFVRIVQIVQLQNSKWGFLEAVQKSGAPPPRSVLV
QQCVRDRGLLVTLCDYAMPAKKYQPSVVVISFFTAVAVEVFGALTVIDADTVRKVIQFVF
KGLDPNANASPDHKAGALMIASLLANRAALASDIIKNLIGSIARIAQKDAKEFADLPWLR
TSLMAIISIVQSQSVQIFPKKAVETLNEIRDFAGVLFGLSNEFNIETFLTVYLESLVNYS
SSDEYCRSALISTLETVNVKDHIHNIVIKVLTSCTALSKRMGKSELPDSGCWAKQVFVVI
DKNYPSELRGAVRKFLEDSSEKTKKGDSVFEVLCMMFDGSVDASLPVTDSKLWFSLEHPK
PEIRKATLSSLSKSKILKAEAVDSQKLASIQQAISRRLQDDDLSVVQAALSLDGLTRVIS
GPDLLESLRDILVRCAEITSVTLVPSEASAVARSCLECAILNFKDLTEYKKEVARMLFPL
LLVLPKTQKLNLKALKLATEIQWSFYKNISLSCDLISSGQDKKLETSSTEINMKTICAFG
ETFAAQPVECLTWLIECSNDSELSKTLIFLVILQSLNTEKKDPSGFAILFQACFPVLKQE
WSVYESTSCNLPEQEFTVEKLERGCSDFLGQLSKSNFKALNANILVCIFWRLLQAFVSAV
QLSSTDQADSGELLSTLHELFVFFATSRLAHVLRGQFHSVVAKCNISPVSFLSKYFTEEG
VPVAVQIESLHSIASTCSQLSLEKSIRDGHFLPLLSFPSVLVPLSSENKDIRAAAVTCME
GLDALGQYVFKSSGKNGNDAMLTRSTWTPSLGKLLELIVQQKRLILSDGDFIPSFFTAVL
GPPCNSLVVPQSIDESFDERTKEAILLFVLKSALKLSPYGKLVILSLFKGMSSSIMHISG
VKSLLSELLERRSQCFSPNKSFQALSTIEIETLCILLEGCASSSASSAETIWSEHLIKAL
KVDSEPPEDPAIIRPCVTVLQNLSCSLYNCLNTETQDQVFQNLVFLFRNDCGEIQNAAKD
ALLRINVTSLTVSKLLKLILAKEGQLSLSSSGKKKKKQVKQLSDPLQHDLFYKEGSMVTF
LSSLLDALLMKKTIENRVSLIGPLFEVLEKVFSDDWLAGKAQNSSDVTQTTGSTVTYVQQ
AVLSVLEDITTSLFSAVPLEENISNKLDIKLLVECARAAKDALARNHAFSLLTSIAKVAP
QKVLDHIFGIFTVIGESAVSQSDSYSQTVFEDLISTVVPYWISKTNNPEELLQIFIKVLP
EIAECRRIKLVVFLLRVLGERTTLASVFILLIRSLISRTSMSLESSASSVTSKEWEYLFA
AQLCEQYSCIIWLPSLVSLLQQISAGNQSEEQLAELLLGMQFVAHKLQDTELIFKIESGE
DSDEIQRSLGALLEQVVSHLELLDGRGKQSKVTNSVKKELRDCMHAVLKTITREMVPSSY
FKGIVLLLDHSNGKVKKKALGLLCETIRERDMVKPKRKGKSNLKHESASSWVDLDECSLK
SFEGMCSKILHLVDSSTDESSVPVKLSALSAFEVLANKFPSQDSIFNSCLESVTKQIASE
NLAVSSSCLRTTGALVNVLGPRALSELPHIMDYLLKRAHNIASSAKVLKNSHEKAGLQDS
LLTSVLVTLEAVVDKLGGFLNPYLEDIIELMVLHPEYASGSDIKLKAKADTVRRLVCEKV
PVRLTVAPLLKVYREAVQSGESSLSVTFGMLSNLIGTMDRSAIGMYHVRIFELCLLALDL
RRESPVSVKRIDIVEESVIDSMIVLSLKLTENMFKPLFLRSLEWAESEVEGPGSTESRKL
DRTISFYRLISKLVERHRSLFVPYFKYLLDGCTLYLTQDALSVGLTPKRKKSKVAEVVTT
SKGEISPRQWHLRALMVSSLHKCFVYDAGSLQFLDATNFQTLLKPIVAQLVVDPPSSLQE
FPDAPSVEEVNDSLVACLGQMAVTSGSDLLWKPLNHEVLMQTRSEKIRARILGLRVIKYM
VENLKEEYLTLLPETIPFLGELLEDMELPVKTLAQEILKEMETLSGENLRDYL
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacattagaagcacagttacgaataatcaaatccctaaacaacttagaaatc
aaatcaacaaaaaaaccattcacaaatccatcaatcttatacgatccacgagtcgcagct
gatctagacatcgattcactctattctattgctatttcgagtttagatgtgttggtaaaa
agtgagctccgatttgaagcttataagaatagtttgttcagttataagagtagagaattg
aatagagctttacaaggtagagttgaaaatgaagagattgatgtatcgatttcttcgtat
ttgaggttgttgtctgggtatttgttggttgattcggctttgcatactttggagtatctt
gtgcggcgttacatggttcatgtgtataacattgatgaattggtgaattgtgcgttgccg
tatcatgatacagctgcctttgtaaggattgtgcagatagtgcaattgcaaaatagtaag
tggggatttcttgaagcggttcagaagtcaggtgcaccaccaccaaggagtgttttagtg
caacaatgtgtacgagacagagggcttttggtgactttatgtgattacgcgatgccggca
aagaaataccagccttccgtagtcgttattagcttttttactgcagttgctgttgaggta
tttggagctttgacggttatagatgctgataccgtgagaaaagttattcaatttgtattt
aaaggacttgatccaaatgcgaacgcaagccctgaccataaggctggtgccttgatgata
gctagtttattggcaaacagagcagctttggcttctgatattatcaagaatttgattggg
tcaattgcaaggattgctcaaaaagatgcaaaagaatttgctgatttaccatggctacgt
acgtcactcatggctatcataagcatcgtgcagtcacagtccgttcagatattcccaaag
aaagcagtggagactcttaatgaaattagggattttgctggagtactttttggactgtcg
aatgagttcaatattgagacgttcttgacagtttatttggaatcattggttaactatagt
tcttcagatgaatattgccgtagcgccttgatatccacattagagactgtcaatgtaaag
gatcatattcataatattgtgattaaggtgcttacttcatgcacagcgttatctaaaaga
atgggtaaatctgaattacctgattcaggatgctgggccaaacaagtgttcgttgttatt
gataagaattatccatctgagctgcgtggagctgttagaaagttcctggaggactcaagt
gagaaaactaagaaaggggactcggtttttgaggttctctgcatgatgtttgatggcagt
gtcgatgcatcactacctgtaactgattcaaaactgtggttctcacttgaacatcctaag
ccggagatccgtaaagcaaccctatctagtttgtccaaatcaaagattctgaaagctgaa
gctgtcgattctcagaagcttgcttctattcaacaagcaatatcgaggcggcttcaagat
gatgatcttagtgttgttcaagcggctttatctctggatgggttgactagggtcattagc
gggcctgatcttctcgagtcattacgtgatattcttgttagatgcgctgaaatcacaagt
gtgacacttgtcccatctgaagctagtgctgttgctcgttcatgccttgaatgtgcaatt
ttgaacttcaaagatctgactgaatataaaaaagaagttgctagaatgttgtttccctta
cttctagttcttccgaagacacagaagttaaacttaaaggctctaaagttggctacggaa
attcaatggtcattttacaagaatatatctctttcatgtgatctaatatcctcagggcaa
gacaagaaattggaaactagctcaactgaaattaatatgaagactatttgtgcttttggt
gaaaccttcgccgcacaacccgtagaatgtttaacttggttgatcgagtgctccaacgat
tcagagctgtcgaagacattgatcttcttagtgatactgcaatcacttaatactgaaaag
aaagatccttctggctttgcaatactatttcaagcctgctttccggttctcaagcaagaa
tggagtgtatatgagtctacgagttgtaaccttccagagcaggagtttactgtggagaag
ctggaaaggggttgcagcgattttttgggccagctttccaagtccaacttcaaagcatta
aatgcaaatattttggtttgcattttttggaggttgctgcaagcatttgtttcggcggtc
cagctgagtagcacggatcaagctgacagtggagaattgctatctactcttcatgagttg
tttgtcttctttgcaacatctcgattggctcatgttttgcggggacagttccattcagtt
gtggcgaaatgcaacatctctccagtcagcttcctgtccaaatattttactgaagaaggc
gtccctgttgcagttcaaattgaaagtcttcatagtattgcttctacttgttcgcagctg
tcactggagaaaagtataagagacggccacttccttccccttctcagttttccttctgtt
ttggttcctctttctagcgaaaacaaggacatccgagcagcagcagtgacgtgcatggag
gggcttgatgcactggggcagtacgtgttcaagtctagcgggaaaaacgggaatgatgct
atgttgactcgtagcacttggacaccttccctagggaaacttttggagttaatagtacaa
cagaagaggctgatcttatcagatggggattttattccatcattttttacagctgtacta
ggccctccttgcaatagtcttgtagtgccgcaaagtattgatgaaagttttgatgagcgc
acaaaggaagctatcctccttttcgttttaaaatctgcgctcaaactatctccatatggg
aagcttgtcatcctgtcattgtttaaaggaatgagcagttctatcatgcatataagtggt
gttaagtcattactgtctgaactcctggaaaggcgcagccaatgttttagccccaataaa
tccttccaagcattatcaacaattgaaattgagacgttatgcattctgctggagggttgc
gcttcatctagtgcttcttctgctgaaacgatatggtccgagcatctcatcaaggcattg
aaagtcgatagtgagcccccagaagatcctgctatcataaggccctgtgtaactgtgctt
cagaatctgagttgctccctatacaattgtttgaatactgagacacaggaccaagttttt
caaaatcttgtgtttctgtttcgaaatgactgtggtgaaatccagaatgcagcgaaagat
gctcttcttcgaatcaatgttacatctttaacggtaagcaagttgctaaagttgattctt
gcaaaagaaggccagttaagtctttcttctagtggaaagaagaaaaagaaacaagtaaaa
cagttgagtgaccctctgcaacatgatctcttttataaagaaggaagcatggtcactttc
cttagctcactccttgatgctttgctcatgaagaaaactatagaaaacagggtgtctctg
attgggcctctatttgaggttctcgaaaaggtcttttcagatgattggctcgctggcaaa
gctcagaattcttctgatgttactcaaacaactggcagtacagtaacttatgttcaacag
gctgtgttatcagtccttgaagacataactacttctcttttctctgctgttccattagag
gaaaacataagtaacaaattggatattaagctcttggttgagtgcgcacgggcagcgaag
gatgcactggcacgcaatcatgcgttctctctgctaacttcaatcgcgaaagttgcacca
caaaaagtcttggaccatatttttggtatctttactgtaattggggagtccgcagtttcc
cagagtgacagctattcacagacagtctttgaggacttgatatcaacggtagttccatat
tggatatctaaaacaaataaccctgaggaacttcttcagatttttataaaggtattgcct
gaaattgccgagtgcagaaggatcaaacttgtagtcttcttgttgagggttcttggagaa
cgaactaccctggcgtctgtatttattctgcttattcgttcattgatttcacggacaagc
atgtccctagagtcctctgcttcgtctgtgactagcaaagagtgggagtatctgtttgct
gcacaactgtgcgagcagtattcatgcattatatggcttccatctcttgtttctcttctt
caacaaatatcggcgggtaaccaatctgaagaacaacttgccgagttactacttggaatg
cagttcgttgctcacaaacttcaggacactgagctgattttcaaaattgaatccggagaa
gactccgatgaaattcagagatcactaggagcacttctggagcaggttgtttctcacttg
gaacttcttgatggaagagggaagcaatcaaaggttactaatagtgtgaagaaagaatta
agggactgtatgcatgctgtcttgaagaccatcacaagagaaatggttccttcatcatat
tttaaaggaatagtactgctgttagatcattcaaatggaaaagtgaaaaagaaggctctt
gggcttctttgtgagacaatcagggagcgcgacatggttaaaccaaagcggaagggtaaa
tcaaatttgaaacatgaatcagctagctcctgggttgatttggatgagtgttctttgaag
tcttttgaaggaatgtgctcgaaaattcttcacttggttgatagttctacagatgagtcc
agtgttccagtaaagctatctgcactttctgcatttgaagtattggctaataagtttccc
tcgcaagattccatcttcaactcatgtcttgagtctgttacaaagcaaattgcttctgaa
aatttggcggtttcttccagctgccttcgcacaacaggtgctttagtcaatgtgcttggt
cccagggcattgtcggagcttcctcatatcatggactacttgttgaagagggctcataac
attgcatcttcagctaaagtactcaaaaacagccacgagaaagcaggacttcaggattct
cttttgacatctgttcttgtcactttggaggctgtagtagacaagcttggtgggttttta
aatccttatcttgaagatattatagagcttatggtcttgcatccagaatatgcttcagga
tcagatataaagttgaaggctaaagcagatacagtgaggagactcgtctgtgagaaagtc
cctgtccgtcttactgtcgcaccattgctcaaggtgtacagagaggctgtccaatctggt
gaatccagtttatcagttactttcggaatgttatcaaatctaattggtactatggataga
tccgctattggaatgtaccacgtgaggatatttgaactgtgcctcttagcgcttgatctt
cgccgggaaagtcctgtttcagttaaaagaatcgatattgtggaagaaagtgttattgac
tcgatgattgttttgtctttgaaacttacggagaacatgttcaagcctctttttctccga
agccttgaatgggcggaatctgaagtcgaaggacctggttctactgaaagcaggaaatta
gatagaactatatctttctacagattaatcagcaagcttgttgaacgccacagatctttg
tttgttccctatttcaagtatttgctggacggatgcacactatatttaacacaagatgca
ttgagtgttgggttgacaccaaagagaaagaagtccaaggttgccgaagttgtcacaact
agtaagggagaaatatcacctagacaatggcatcttagagcactaatggtttcttccttg
cacaaatgctttgtgtatgatgctgggagcttgcagtttcttgatgcaactaattttcag
actttgttgaaaccaattgtggctcagttggtggtggacccaccatcttctctacaagag
tttccagatgctccatcggttgaggaagtgaatgattcactggttgcatgtcttggtcag
atggccgtaacttctggctcagatctactgtggaagcccctaaaccatgaggtgttgatg
caaacaaggagtgagaagattcgtgcgaggatattaggtttgagagtcatcaagtacatg
gtggagaatctgaaagaagaatacctcacacttcttcccgagacaattccgttccttggt
gaactacttgaagatatggagcttcctgttaagacacttgctcaagaaattctcaaagaa
atggagacactcagtggtgaaaacttgcgcgattacttgtag
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