KEGG   Papaver somniferum (opium poppy): 113322025
Entry
113322025         CDS       T05758                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03030  DNA replication
psom03410  Base excision repair
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113322025
   03410 Base excision repair
    113322025
   03420 Nucleotide excision repair
    113322025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psom03032]
    113322025
   03400 DNA repair and recombination proteins [BR:psom03400]
    113322025
Enzymes [BR:psom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113322025
DNA replication proteins [BR:psom03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113322025
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113322025
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 AbiJ_NTD4
Other DBs
NCBI-GeneID: 113322025
NCBI-ProteinID: XP_026425809
LinkDB
Position
11:4809407..4826576
AA seq 2203 aa
MSDSRWKNRSNNRDGDSSRSFKKQKFVKNVEEERESKLGFDVFSEGDKRLGWLLTSSSSS
WEDQETRKVYSCVDLYFVCQDGTTFKSKYKFQPYFYAATKPKMETGVEAYLKRRYEGQIA
DVEIVEKEDLALKNHLSGMRKSYLKISFDTIQHLMHVKNDLLHVVQRNQEKNDAAEAYES
ILSGKSNQRPLDFIDCIVDLREYDVPYHVRFAIDKDIRCGQWYDVSVSSAGVILERRTDL
LQRAEVHVCAFDIETTKLPLKFPDAEYDQVMMISYMVDGQGYLIINRECVGEDIEDLEYT
PKPEFEGCFTVKNVKNEVELIKQWFSHMQEVKPGIYVTYNGDFFDWPFLEIRAAHHGLSM
SDEIGFLCDRNQGECRAKFACHMDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVDPE
DMVRFAMEQPQTMASYSVSDAVATYFLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCE
MLLMVQAYMANVICPNKHQAELEKFHNNQLLESETYIGGHVECLESGVFRSDLPTKFQLD
PAAYEQLICNLDRDLQYAIRVEGKMDLDSVSNYGEVKNAILEKLEMLRDEPIREEPPLIY
HLDVAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKTCLRTLEWVWRGETFTAKKSDY
YHLKRQIESELVDNVRGQIAKSFLDLPKTEQQVKLKDRLKKYCQKAYKRVLDKPVTEVRE
AGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLGDAKAIGNSIKIQEAQDMVVLYDS
LQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARVLVEKIGRPLELDTDG
IWCALPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLEDPINKTYTTQ
SECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTIAELKGFEIKRRGELKLIKV
FQAEVFDKFLDGQTLEQCYSAVAAVANRWLDLLDNQGIDVADKELLDYISESSTMSKSLA
DYGEQKSCAVTTARRLADFLGDAMVKDKGLRCQYIVAREPQGSSVSERAIPVAIFGSADV
MEHYVRKWCRISSVGDFRSIVDWSYYKQRLGSTIQKIITIPAAMQKVANPVPRVIHPDWL
HKRVREKDDKFRQRKLVDMFSPMIKGHNAQTDTNDVGEEAGIEDLEDFGNKGVGSEIGPR
PIVRSYEVNKGQSAEQFSPRVSLEQSTTITYENIDRNVDYQAWLAVKKRKWKDTREEKNR
LKRFRQSDGISELPAAIHTRKKGQGLNGVSSFLKRNELSLARTYWQILQLVPCPEAGHFF
AWVVADGMMLKVPIHVPRVFYLNTKAPITEEFPGKRVNRILPHSHPSFTLIEVVTEEDQF
KLERKKLAAHLADPEVEGIYETKVPLEFNAILQIGCVCKVDKVAKNRNPQEGWKLEELQM
KTTTECSYLAQSIGFFYLYHSISEARAIYATYFPASSTIIVIVVNPFQNKELTTSILEKQ
FREACQALSVEPSLSGKKCTSKVEYVGHVKDAERLLQRAIIDYRHEHHGPAIGVIECPDV
HSVRSGIRVLDDFPCVSIPCNARDSNYQALGWQIIAAKIGMQRCAASSQWLKERISLSRY
AHVPLGNFELDWLLFTADTFLSRALRDQQQLLWISDDGIPDLGGINEDDTCFADEVSHPV
LTYPGAYRKVSVELKIHHLAVNALLKSNQINEMEGGALFGFDLDISGAHEQSGLDEAGAC
ASAFRVLKQLIQRCIQDAIKFGNVYADALLQHLYRWFCSPQSKLHDPALHRVLHKIMEKV
FALLLAEFRKLGAKIIFADFSKIIIDTGKSDLSAAQAYCDCLLKTLQTRDLFEWVELEPL
HFFHSLLFMDQYNYGAIQAKADGASSADVSKAPDDCIADEPQIDIVSNWNISEYLPKVTQ
DHFILIVSEFLYKPWRYAQEQAAVRASSVDGSLCTPSITGAAAESFEIQLTAYLKEQVSS
FFTEKLLKIVRDITQHFKTNKSRNDGQQSHELPHVAGSSSHTGDAALDFIKHVCAVLALD
RSVQHNALVLRRNLLKFVRVKEFDPVAEFRNPCVSFTLPNVICSYCNDCRDLDLCRDSAL
LSDEWRCAVPQCGQPYNREVMENALLQIVRQRERLYHIQDLVCLKCNHIKAAHLAEQCKC
AGAFKCKEDASEYHSKMQVFLNIAVRQNFQLLQEAISWILEVQ
NT seq 6612 nt   +upstreamnt  +downstreamnt
atgagtgatagtagatggaaaaatcgaagtaataatagagatggagattcatcgcgaagt
tttaagaagcagaaatttgttaaaaatgttgaggaagaaagagaaagtaaattagggttt
gatgttttctctgaaggtgataagagattgggatggttactcacttcatcttcttcatcg
tgggaagaccaagagacgaggaaggtttatagttgtgtggatctctattttgtttgtcag
gatgggactacgtttaaatcgaagtataaatttcaaccttatttctatgcggcaaccaaa
cctaaaatggaaacgggtgtggaggcatatcttaaacgacgatatgaagggcaaattgct
gatgtagaaattgtagagaaagaggaccttgctttaaaaaaccacttatctggcatgcga
aagtcatatctcaagatatccttcgacactattcagcatttgatgcatgtaaaaaatgat
ttactgcacgttgttcaaagaaaccaggaaaagaatgatgctgcggaagcatatgaatcg
atattatctggaaagagcaaccaaagacctctagattttatagattgcattgttgatctc
cgggagtatgatgttccgtatcatgtacggtttgctattgataaagacataaggtgcggt
cagtggtatgatgttagtgtatccagcgctggtgttattcttgagagaagaacagatctt
ttacaacgtgctgaagttcatgtttgtgcatttgatattgagacaacaaagcttcctttg
aaatttcctgatgctgaatatgatcaagtaatgatgatatcgtacatggtggatgggcaa
gggtaccttataattaatagagagtgtgtgggggaggatatagaagatttggagtacact
cccaaaccagaatttgaaggatgtttcacagtgaaaaatgtgaaaaatgaggtcgaactc
atcaaacaatggttttcacatatgcaagaggtgaaacctggtatttacgtgacgtacaat
ggagatttttttgattggccttttcttgaaattagagcagcacaccatggactttcgatg
agtgatgagataggatttctatgtgacagaaatcaaggggaatgtcgtgctaaattcgct
tgccatatggattgttttgcttgggtcaaacgtgatagttatctccctcaaggaagccag
ggtctaaaggctgttactaaggccaagttgggttatgatccattagaagtcgatcctgag
gatatggttcgctttgccatggaacaaccacagacaatggcgtcttattctgtatcagac
gctgttgcaacttacttcctttatatgacatatgttcatccgtttatattctcgcttgct
acaattatacctatgccgcctgatgaggtattgcggaaaggaagtggtactctttgtgag
atgcttcttatggttcaggcttacatggcaaatgttatctgtcctaataaacaccaagca
gagctagagaagtttcataacaaccagcttttagagagcgaaacttatattggtggccat
gtggaatgtcttgaaagtggtgttttcagatctgatctacccactaaatttcaacttgat
ccagctgcttatgagcaattaatctgcaaccttgatcgtgatcttcaatatgcaataaga
gtagagggtaagatggatttggattcagtctccaactatggcgaagtaaagaacgctatc
cttgaaaagctagagatgctgcgtgatgagcccatacgcgaagagcccccacttatatat
catttagatgttgctgcaatgtatccaaatatcattttaacaaataggcttcagccccct
tcgatagtttcagatgaaatctgcaccgcatgtgactttaaccgccctggaaaaacctgt
ctgcggactctagaatgggtttggcgtggagaaaccttcaccgcaaagaaaagtgactat
tatcatttgaagaggcaaattgagtctgagctagttgataatgtacgtggtcaaatagca
aaatcttttctagaccttcccaagactgagcaacaagtaaaactgaaagaccggctaaag
aagtattgccaaaaggcatataaaagggtcctcgacaaaccagtcacagaggtgcgagaa
gcagggatatgcatgcgtgaaaatcctttttatgttgacacagttcgtagtttcagggat
agaaggtacgaatataaaggacttaataaagtctggaaggggaaactaggagatgcaaag
gccattgggaattctataaagatccaggaagcacaagatatggtagttctctatgattct
ttacagcttgctcacaaatgtattctaaattccttctatggatatgtcatgcgaaagggt
gcaagatggtactcgatggaaatggctggtgtagttacttataccggagcaaaaataatt
cagaatgctcgtgtattagttgaaaaaattgggagaccattggagttggatacagacggt
atctggtgtgcacttcctgggtcttttccagagaactttaccttcaaaacaaaagacttg
aagaaaaagttgacaatctcgtatccttgtgtcatgcttaatgttgatgtcgcaagaaac
aacacaaatgatcaataccagacactcgaagatcctatcaataagacatatactacacaa
agcgaatgctctattgaatttgaagtggatggtccatataaggcgatgatcctaccagct
tcaaaggaagaggggatattaattaagaagcggtatgctgtttttaatgacgacggaacc
attgcggagcttaaaggttttgaaattaagcgtagaggtgagcttaagctcatcaaagtt
ttccaggccgaggttttcgacaagttcctcgatgggcaaaccctcgagcaatgttattcg
gcagttgcagctgttgctaaccgctggcttgatcttcttgacaatcaaggaatcgatgtt
gctgataaagagttgcttgattacatatcggaatcaagcaccatgagtaaatctttagca
gactatggagagcagaagtcgtgtgctgtgaccactgcaaggcgacttgctgattttctt
ggtgatgcaatggttaaagataaaggactccgttgtcagtatatagttgcacgtgagcca
caaggaagttcagtaagtgaacgtgcgattccagttgcaatatttgggtctgcagatgtt
atggagcattatgtgcggaagtggtgcagaatatcatcagttggggacttccgatccata
gttgactggtcctattataagcagcgacttggttcaacaattcaaaaaattattactatt
cctgcagctatgcaaaaggttgcgaaccctgtcccaagagtaattcatcctgattggcta
cataaaagagttcgtgaaaaggatgacaagtttcgccaacggaaattggttgatatgttc
agtccgatgataaaaggtcataatgctcaaacggatactaacgatgtgggggaagaagca
ggcattgaagatctagaggatttcggaaacaaaggtgtcggttctgaaattggaccgagg
cctatagttcgcagctacgaagtcaacaaaggacagtcagcagagcaattttctccgcgg
gtttcccttgaacagtcaactaccatcacctatgaaaatattgacaggaatgttgattat
caggcgtggcttgcggtaaagaagcgaaaatggaaagatacccgcgaggaaaaaaatagg
ttgaagagattccgtcagtcagatggcatctctgagttgcctgctgccattcacacacgt
aaaaaaggtcaaggtctgaatggagttagttcatttcttaagagaaatgaactgtcgctt
gctcgaacatactggcagatactacagcttgttccgtgtccagaagctggtcactttttt
gcttgggttgtagctgacggtatgatgctcaaggttccaattcatgttcctagagtattt
tacctcaacacgaaagcaccaatcacagaagaatttcctggcaagcgtgtgaacagaatc
cttccacattctcatcctagctttactctaattgaggtggtaactgaagaagaccagttt
aaattggaaaggaagaaactggctgctcaccttgcagacccggaagttgagggtatatat
gagacaaaggtgccattagaatttaatgctatccttcagattggttgtgtatgtaaagtg
gacaaggtggctaaaaaccgaaaccctcaggaaggttggaaactggaggaactgcaaatg
aagaccactacagaatgctcttatctggcacaatccattggtttcttctacttgtatcac
agcatatctgaagcccgagcaatttatgcaacatattttcctgcatctagtacaataata
gttatcgtggtcaatcctttccaaaacaaagaattaaccacgtctattttagagaagcaa
tttcgtgaagcgtgccaagcattatctgttgaaccttctttgtctggaaaaaaatgcact
tccaaggtggagtatgttggacatgtcaaagatgctgaaaggcttttgcaaagagcaatc
attgattacagacatgaacatcatggacctgcaattggtgtcattgagtgtccagatgtt
cattcagtaaggtcaggaatacgtgttctcgatgatttcccatgtgtcagcattccttgc
aatgcccgtgatagcaactatcaggcccttgggtggcaaatcattgctgcaaaaattgga
atgcaacgatgtgctgcatcttcccagtggttgaaggagagaatctcactttcaagatat
gcacatgttccgttggggaattttgaacttgattggcttctatttacagcggatacgttc
ctttctagggctttgcgtgatcagcaacagttattatggatatctgatgatggcattcca
gatctaggaggcattaatgaggatgatacatgctttgcagatgaagtcagccatcctgtt
cttacctaccccggagcctatcgaaaagtctccgtggagctaaagattcatcacctggct
gtaaatgctcttctgaagagcaaccaaatcaatgagatggaaggaggagccttgtttgga
tttgaccttgatatttctggagcacatgaacaaagtggccttgatgaggctggtgcatgt
gcatctgcatttcgtgtgcttaagcagttgattcagagatgcattcaggatgcaatcaaa
tttggaaatgtatacgccgatgcattactgcaacatctctacagatggttttgtagtcca
cagtcaaaactccatgatccagctctgcaccgggtattacacaagatcatggagaaggtg
tttgctttgttgcttgctgagttccggaaattaggggcaaaaatcatattcgcggacttc
tcgaagattattattgacactggaaagtcagatctatctgctgctcaagcttactgtgat
tgtttattaaaaacactgcagaccagagatcttttcgagtgggttgagcttgaacccctg
cacttcttccactcattgctattcatggatcagtacaactatggcgcgatccaggctaaa
gccgatggagcatcttctgcagatgtttcaaaggctcctgatgattgtatagcagatgaa
ccccagattgacattgtatcgaactggaatatatcagagtacttgccgaaggtgactcag
gatcattttattttaattgtctccgaatttttgtataaaccatggaggtatgcacaagag
caagctgcagttagagcatcctcagtagatggcagcctgtgcactccgtcaataaccggt
gcagctgctgagtcttttgaaatacagctgacagcatatcttaaagagcaggtcagctcc
ttttttacggagaaacttcttaagattgtacgtgatatcactcaacattttaagacgaat
aaatctaggaatgatgggcagcaatctcatgaattgcctcatgtagctggctccagctca
catacaggggatgctgcattagatttcattaagcatgtctgtgctgttcttgctcttgac
cgtagtgttcaacataacgctctggtgctgagaaggaacctcttaaaatttgtccgtgtt
aaggagtttgatccagtagcagagtttcgaaacccctgtgtgtcgttcaccttaccaaat
gtgatttgcagctactgcaatgactgccgagacttggatctatgccgtgattcagcttta
ctttcagatgagtggcgatgtgctgtaccacagtgtgggcagccttacaaccgtgaggtg
atggagaatgcacttctccaaatagttcgtcagagagaacgcctctaccatattcaggat
ctcgtgtgtctcaagtgcaaccatataaaagctgcccatttagctgaacaatgcaagtgt
gctggcgcattcaagtgcaaagaagatgcatctgaataccacagcaaaatgcaagttttc
ctaaatattgctgttcgtcaaaattttcaacttcttcaagaggccatctcatggatatta
gaagttcaataa

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