Papaver somniferum (opium poppy): 113322132
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Entry
113322132 CDS
T05758
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03030
DNA replication
psom03410
Base excision repair
psom03420
Nucleotide excision repair
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113322132
03410 Base excision repair
113322132
03420 Nucleotide excision repair
113322132
03430 Mismatch repair
113322132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113322132
03400 DNA repair and recombination proteins [BR:
psom03400
]
113322132
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113322132
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113322132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
AAA_30
PTCB-BRCT
Rad17
AAA_19
Gp44_lid
nSTAND3
BRCT_2
RNA_helicase
Zeta_toxin
AAA_assoc_2
AAA_18
NTPase_1
AAA_24
Sigma54_activ_2
AAA_16
AAA_14
RsgA_GTPase
RuvB_N
AAA_10
Motif
Other DBs
NCBI-GeneID:
113322132
NCBI-ProteinID:
XP_026425938
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All DBs
Position
11:106165072..106173072
Genome browser
AA seq
997 aa
AA seq
DB search
MGDIRKWFMKAHTKNDATNPAAKPSAADAPAVKPAAIIPQAEQPTNGGQESSGRKNTSRY
FATKADKSKDEQQAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKEEKDGGSKPPPTKK
LLKAKEEDDNEDDDDDFEPSPAKKLKSTPRKGVKKSVEIDEDDDEVGGTPRKPAGRGSGG
RSSAAAPAGGRGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPNCLLGKTFVISGTLD
SLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLI
RKSKPTRAPPEELKNTFGKGATSQPKGSPLKVVKGNEVSPSVVKKTPRKGSAQGVSPAKR
KTQVAGGSSLTWPEKYKPKTPNDILGNQTLVKQLHEWLSHWNDHFLHAKQQGKGKKQNDN
GAKKAVLISGSPGIGKSTSAKLVSQMLGFQGIEVNASDSRGKADSKILKGIGGSMANSIK
ELVSNESLSVKMERSKHQKTVLIMDEVDGMSSGDRGGVADLIASIKISKIPIICICNDRH
SQKLKSLLNYCLLLNYRKPTKLQMAKRLMQVATTEGIKVDNEMALEELADRVNGDMRMAL
NQLQYMSLSMSVIQYDDVRRRLLSSAKDEDISPFTAVDKLFDFNGGKLRMDERVDLCMSD
ADLVPLLIQENYLNFRPSAVGKDENGIKRMNMIARAAESIGSGDIVNVQIRRYQQWQLFQ
TSSLVSSIIPAALLHGRRETFEQGERNFNRFGGWLGKNSTMGKNMRLLEDVHLHLLASRE
SISHRETLRVDYFPLIRIHLTDPLRSLDKDEAVQKVVEFMDAYSISQEDYDSIMELSQFK
KHPNPLEGILPAVKAALTKAYKQGSSSRVIRSADLITLPGFKKAPKKRIAAMLEPVDSGG
LTEENGDTLAESEEENASDTEDTDGPDNGEKKLQLDLQSNSKKGIQVQLDLKKTGKSSAK
KAPASKSKAASGSASAKKGSRNAGGSAAAASASKRKR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgggggatattaggaaatggttcatgaaagcgcataccaagaatgatgcaacaaaccct
gctgccaaaccctctgctgcagatgcacctgctgttaaaccggctgccattatcccacag
gcagaacaacctacgaatggagggcaagagagctcagggaggaagaacactagtagatac
tttgctactaaggcagataagtctaaagatgaacagcaggctgagaaaacagtagctaaa
agaaaaccccaagaaagttctaaggcattagacgaagatttaaagcctccacctgtgaag
aagcttcacaaggctaaagaagaaaaagatggtggttctaaacctccacccacgaagaag
cttctcaaggctaaagaagaagatgataatgaagatgatgatgatgactttgagcctagt
cctgccaaaaaattgaagagtacccctcgtaaaggagtaaagaaatctgttgaaatagat
gaggacgatgatgaagtgggtggtactcctcgcaaaccagctggaagaggtagtggtgga
agaagttcagcagcagcccctgctggtggaagagggagagggagaggtggtggtggaaga
ggcgggttcatgaattttggtgaaaggaaagaccctccccacaaaggagaaaaggaagtc
ccagagggtgcgcctaattgtttacttggtaaaacttttgttattagcggcacccttgac
agtttggaacgggaggaagcagaagacttgattaagcgccatggaggtcgagttactggg
tctgtcagtaaaaaaacgaattatcttcttgctgatgaagatattgggggacgaaaatca
gaaaaagctaaagaactgggcactgcatttttaaccgaagatgggttgttcgacctcatt
cgcaaatcaaaacccacgagagcacccccagaagaattaaaaaacacttttggcaagggt
gctacctcgcaaccaaaaggaagtcctctgaaagtagtaaaaggtaacgaagtctcgccc
tctgttgtaaagaaaaccccccgaaaaggttcggctcaaggcgtttctcctgctaaacgt
aaaacccaagttgcgggtggttcctcattaacatggccagaaaaatacaaaccgaagact
cccaatgatatcttgggcaaccagacacttgttaagcagcttcacgagtggttgtcccat
tggaatgatcactttctacatgctaagcagcagggaaagggaaaaaaacagaatgacaat
ggagctaaaaaagctgttttgataagtggatcacctggcattggaaagagtacatcggca
aaactggttagccagatgcttggcttccagggcatagaggtcaatgctagtgacagccgg
ggaaaagctgactcgaaaattcttaaaggaattggtggaagcatggcaaactctataaaa
gaacttgtcagcaatgaatctttgagtgttaagatggaacggtcaaaacatcaaaagact
gtcttgattatggatgaagttgatggcatgtcctccggagataggggtggggtggctgac
cttattgccagcatcaaaatttccaaaatcccgatcatctgtatttgcaatgaccgtcat
agtcagaaactgaaaagtcttctcaactactgtttgcttctcaactacaggaaaccgaca
aaactgcagatggcaaagaggttaatgcaagttgcaactacagaaggcatcaaggttgat
aatgagatggctcttgaggaacttgcagatagagttaatggagatatgcgtatggcactt
aatcagttgcagtacatgagcctctcaatgtctgttatccaatatgatgatgtgcggcga
cgccttcttagtagtgcgaaggatgaggatatttcaccgtttactgctgttgacaagctg
tttgattttaatggtggaaaattgagaatggatgagagggttgacttgtgcatgagcgac
gctgaccttgttcctcttttaatacaggaaaactaccttaattttcgaccaagtgctgtt
ggtaaggatgagaatggaattaagagaatgaacatgattgcgcgtgcggcagaatctatt
ggaagtggagacattgttaatgtacagattcggagataccaacagtggcagctctttcaa
actagttcccttgtgtcaagtataatacctgctgctttgctgcatgggcgaagggagacc
tttgaacagggggagcgcaatttcaatagatttggagggtggctggggaaaaactcgaca
atgggaaagaatatgaggcttttggaggatgtgcatcttcatcttcttgcttctcgagaa
tccatttcacacagggaaaccttacgagtagattacttccctcttattcggatacactta
actgatcctcttagatcgctggataaggatgaagcagttcagaaggttgtggaattcatg
gatgcttactcaataagtcaggaggactatgactcaatcatggagttatcacaattcaag
aagcacccaaatccactcgagggaatactgccagctgttaaagctgcactgacaaaggca
tataagcaaggaagcagctcgcgtgttatacgatcagccgatttaattacgcttccagga
tttaagaaggctccaaagaaacgtattgcagcgatgttggagccagttgatagtggtggt
ctgacagaagagaatggtgacacactagcagaaagtgaagaagaaaatgcttcagatact
gaagacacagatggacctgataatggtgagaaaaagctgcagctggatctccaaagtaat
agcaagaaaggaatccaagtacagcttgatttgaagaagactggcaagtcaagtgcaaag
aaagctcctgctagcaaatcaaaagcagcatctggttctgcatctgcaaagaaaggtagt
cgtaatgctggtggtagtgctgcagctgcttctgcgtccaagagaaagagatga
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