Papaver somniferum (opium poppy): 113322180
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Entry
113322180 CDS
T05758
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113322180
03021 Transcription machinery [BR:
psom03021
]
113322180
Transcription factors [BR:
psom03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
113322180
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
113322180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
113322180
NCBI-ProteinID:
XP_026426005
LinkDB
All DBs
Position
11:complement(132658331..132660724)
Genome browser
AA seq
507 aa
AA seq
DB search
MAETAVETFTETNINVAKSKKKVASKKALKPKKVSDNEANILAGIASSPLSGSVLGKENE
ETLLLSGKKIKKASSKVKSSTEKSFEKELEILKAKFDQMKLEKEKTEEILKDRDEMLKLK
EEELEIKGKEQQKLQVELKKLQKLKEFNPTVSLPLVQSLREKEAEKNEKNKKKKKKNPEM
KKPSSAYVLWCKDQWAEVKKENPDAEFKEISNILGSKWKNVTEEEKKPYEEKYQADREAY
LQIVGKEKRENEAMKLLEEDQKQKTAMELLEQYLQFKQEGAAEVKDGKKKKKEQDPLKPK
RPLTAFFLFSKEVRANHADNKNVVEVSKIAGEEWKKMSEEQKKPYEDIVKKQKEEHLHEM
ELYNQKKAEEAEILRLEEDEQMKIHKQEALQMLKKKEKTENIIKKTKETQQKKKKLKGEN
SVVDPNKPKRPASSFLLFSKEARKNLVQDREGISNATINALISVKWKEMAEEDKKIWNDQ
AAEAMEAYKKELEEYNKSVAAANSSQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacagcagtagaaaccttcactgaaacgaacatcaatgtcgctaaatcaaag
aagaaagtagcaagtaagaaagctttgaaaccaaagaaagtatctgataacgaagctaat
atcttagcaggaattgcttcttcaccattatcaggatctgttcttggtaaagaaaatgaa
gaaacccttttgctttcaggaaagaaaatcaagaaagcttcttcaaaagttaagagtagt
actgagaaatcatttgagaaagagttggaaatattgaaagcaaagtttgatcagatgaag
ctggaaaaggagaaaactgaagagatcttgaaagatcgtgatgagatgttgaaactgaaa
gaagaggagttggagattaaagggaaagaacagcagaaacttcaagttgagttgaagaag
ttgcagaaattgaaggaatttaatcctactgtgagtcttccattggttcaatctctaaga
gagaaagaagcagaaaagaatgaaaagaacaagaaaaagaagaagaagaacccagagatg
aagaaaccatcatctgcttatgttttatggtgcaaagatcaatgggctgaggttaaaaaa
gagaacccagatgctgaattcaaagaaatatcaaacatcttaggatccaaatggaagaat
gtgactgaagaagagaaaaagccatatgaagagaaataccaagctgatagagaagcttat
ttgcagattgttggcaaagagaagcgcgagaacgaggcgatgaagctccttgaagaggat
cagaaacagaaaactgcaatggaattgcttgaacagtatctgcagttcaagcaagaaggt
gcagcagaagtcaaggatggcaagaaaaagaagaaggagcaggatccattgaagccgaaa
aggccattgaccgcattcttcttgttctctaaagaagtgagggctaatcatgctgataac
aagaatgttgtggaggtgtctaagattgcaggagaggaatggaagaaaatgagtgaggag
cagaagaagccttatgaagatattgtgaagaaacaaaaggaggagcaccttcatgaaatg
gagctttacaatcagaagaaggcagaagaagctgaaattttgaggttggaagaggatgaa
cagatgaaaattcataagcaggaagctttgcagatgcttaagaagaaggagaaaactgaa
aacataatcaagaaaacaaaggagacccagcagaagaaaaagaagctgaagggtgaaaac
agtgtagttgaccctaacaagccaaagaggcctgcttcctcattccttctattcagcaaa
gaggcaaggaagaacttggtccaggacagggaagggatcagcaatgcaactatcaatgca
ttgatttcagtgaaatggaaggaaatggctgaagaagataagaagatatggaatgatcaa
gctgcagaggccatggaagcatacaagaaggaattggaagagtacaacaagtctgttgca
gcagctaacagttcacaggcttga
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