Papaver somniferum (opium poppy): 113322263
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Entry
113322263 CDS
T05758
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04142
Lysosome
psom04144
Endocytosis
psom05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113322263
04142 Lysosome
113322263
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113322263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113322263
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113322263
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113322263
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113322263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
113322263
NCBI-ProteinID:
XP_026426109
LinkDB
All DBs
Position
11:120150595..120160601
Genome browser
AA seq
1702 aa
AA seq
DB search
MAAASAPIAMKETLTLPSIGINPQHITFTHVTMESDKYICVRETSPQNSVVIIDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQIAFWKWI
SPKMLGLVTQTSVYHWAIEGESQPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLYSVDQQRSQALEAHAASFATFKVPGNETPSTLISFASKTTNAGQVTS
KLHVIELGAQPGKPAFTKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEATSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGHLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYAELPDIKRVIVNTHAI
EPQSLVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDPRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDSDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADTSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQNIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDASQFLDVIKAAEDGNVYHDLVKYLQMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPLVGDRLYDEALYEAAKIIFAFTSNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKQVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSIYYQNRGCFDQLISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELVYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVSNVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYIEEEDYDRLRESIDM
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWRQSITLSKKDNHYKDAMETCSQSGE
RELAEELLVYFIDQGKKECFASCLFVCYDVIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDRIEAQSEVKAKEKEEKDMVAQQNMYAQLLPLALPAPPGMGGMGGGGYGPP
PPMGGMGMPPMPAFGMPPMGSY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctagcgccccgatcgccatgaaagaaacattaactttgccaagtattgga
ataaatccacagcatataacattcacgcatgtaaccatggaatcggataagtacatttgt
gtaagagaaacatcgccgcagaatagtgttgttattattgatatgagtatgccgaatcaa
ccattgaggagacctatcactgctgattctgctttgatgaaccctaattccagaattctt
gctcttaaagctcaactgccgggaaccactcaggatcacttacaaatatttaacattgaa
atgaaagcaaaaatgaaatcacatcaaatgcctgagcagattgccttttggaaatggatc
tcaccaaaaatgttgggtctagtcacgcagacctcggtgtatcattgggcaattgaaggt
gagtcacagcctgtaaagatgtttgaaagaacggctaatctagcaaacaatcaaataata
aactaccgatgtgatccttctgaaaagtggttggtcttaattggtattgctcctgggtca
cctgagaggcctcaactggtaaaagggaatatgcagctctattccgtggatcagcagcgc
agtcaagcgcttgaagcacatgcagcatcgtttgccacatttaaagttcccggtaatgaa
actccttcaacgcttattagttttgcctcaaagactaccaatgctggacaagttacttcg
aagctgcatgttattgaacttggtgcccagccaggtaaaccagcttttacgaagaaacag
gcggatcttttcttccccccagattttgctgatgacttccctgtggcaatgcagatttca
cacaagtatggtttgatatacgtgattacaaagcttggacttctatttgtttatgatttg
gagacggctaccgcggtttatagaaaccgaattagtccggaccctatatttttgacggca
gaagctacatcagttggaggcttttatgctgtcaataggagaggtcaggtgctacttgcg
actgtcaatgaagcaaccatagtgccttttgtcagtggccaattaaacaatctggaactt
gctgttaatcttgcaaaaagaggaaaccttcccggggcagaaaatttggttgtccagcgg
tttcaagaattgttttcacagacaaaatataaggaggctgcagagcttgctgcagaatct
ccccaggggatcctccgaactcctgatactgttgcaaagtttcagagtgtacctgtgcaa
gctggccaaactccaccgttattgcaatacttcggaacactgttaactagaggaaagctc
aatgcatttgagtctctggaattatcacgtcttgtagtgaatcagaataaaaagaatctt
ttggaaaattggttggctgaggacaagcttgagtgcagcgaggaacttggagatcttgtg
aagaccgtggataatgaccttgccctgaaaatatatatcaaggctagggctacaccaaaa
gttgttgcagcttttgctgaacgaagggaatttgacaagattcttatttactcgaagcag
gttgggtatacacctgattatctcttccttctgcaaacaattctacgatcagatccccag
ggagctgtcaattttgctctaatgatgtcacaaatggagggaggttgtcctgtagattac
aacacaatcacggatctcttccttcagaggaacatgatccgtgaggccactgcttttttg
ttagatgttctgaagccaaatctaccagaacatggtcacctccagacaaaggtcttggag
atcaatttggtaacatttccaaatgtggctgatgccatcttagctaatggaatgttcagt
cactatgatcgtcctcggattgcacagctctgtgaaaaagctggtctttacgtgcgagcc
cttcagcactatgcagaattgccagatattaaacgtgtcattgtgaatacacatgctatc
gagccacagtcacttgtggagttctttggaaccctctcgaaagaatgggcgttggagtgc
atgaaggaccttttacttgttaatctgaggggaaatctccagataattgtgcagaccgcc
aaagaatattctgagcaattgggtgttgaggcatgtataaaactttttgagcaattcaag
tcttatgagggtttatattttttcttgggatcgtatttgagctccagtgaggatcctgac
attcactttaagtatatcgaggccgcagctaaaactggtcaaatcaaagaggttgaacgc
gtgactagagaatcaaacttctatgatgctgagaaaacaaagaattttcttatggaggcc
aagcttcctgatgcaagacccctgatcaatgtatgtgatcgttttggttttgttccagat
ctcacccactatctctacacgaacaacatgctccgatatatcgaaggttatgttcagaag
gtcaatccaggaaacgctccattagttgtgggtcagctacttgatgatgaatgccctgaa
gatttcattaaggggcttattctttctgtccgctctcttcttccagtggagccccttgtt
gatgagtgtgagaagagaaatcgcctccgcttactaacccaattcttggagcatcttgtg
agtgaaggaagccaagatgtacatgtccacaatgctttaggtaaaataatcatagacagc
aataacaatcctgagcattttctcacgacgaacccatattatgatccacgagtggtgggt
aaatattgtgagaaacgtgaccctactttggctgttgttgcttaccgaagagggcagtgt
gatgatgaacttatcaatgttacaaataagaactccttattcaaattacaggccaggtat
gtggtggagaggatggattccgacctctgggaaaaggttctcaaccctgagaatgagtac
agaagacagcttattgatcaagttgtatcaactgccttgcctgaaagcaagagcccggaa
caagtttctgcgactgttaaagcttttatgactgctgatcttccacatgagctaatagag
cttctcgaaaagatcgtacttcaaaactccgccttcagtgggaactttaatttgcagaat
ctgctgatcctcacagccattaaggcagacacgtcaagagtgatggattacataaacaga
ttagacaatttcgatggacctgcagttggagaggttgctgtggaggcacagctctatgaa
gaagcctttgccattttcaagaagttcaacttgaatgtgcaggccgtgaatgttcttttg
gataacatccaaaacattgaacgagctgtggagtttgcgttccgtgttgaagaggatgct
gtttggagccaggtagccaaggcgcagctcagggagggactcgtgagtgatgcaattgag
tcattcatccgtgcggatgacgcttctcaatttttagatgtcattaaagctgccgaggat
ggtaatgtgtaccatgatttggtcaagtacctccagatggtaaggcagaagtctaaggag
cctaaagtagacagtgagcttatttatgcatatgccaagatagacaggctcagtgacatt
gaagaatttattctcatgcctaatgttgctaatctaccacttgttggcgaccgtttatac
gatgaagcgctatatgaggctgcaaagattatatttgcttttacttctaactgggccaag
ctggctgttacccttgtcaagttgcaacaattccaaggtgcagttgatgcagctagaaaa
gccaacagcgcaaagacatggaagcaagtctgctttgcctgtgttgatgctgaggagttc
cgtttggctcagatatgtggacttaacatcattgtacaggtggacgatctggaggaagtc
agtatttattaccagaatagaggctgctttgatcagcttatatctctgatggagagtggt
ctaggcctggaacgtgcgcacatgggtatctttactgagttaggtgtcctttatgcgaga
taccgttatgagaagcttatggagcacattaaattgttctcaacacgtcttaacattccc
aagcttatacgagcttgtgatgaacaacagcactggaaggaacttgtttatctgtacatc
cagtatgacgagtttgacaatgcagcaaccactattatgaatcattctccggacgcatgg
gaccacatgcagttcaaggatgttgcagttaaagtgtcgaatgttgagctttactacaaa
gccgtgcatttctatctgcaggaacatcctgaccttattaatgatatgctcaatgtactt
gcccttcgcgtggatcatactcgtgtcgtggacattatgcgaaaggctggtcatctgcgt
cttgtgaagccttacatggttgcagttcagagtaacaatgtatctgctgtgaatgaggca
ctgaatgagatctatattgaggaggaggactacgataggttgcgtgagtcaatcgatatg
catgataacttcgaccagattggtcttgcacagaagattgagaaacacgagcttcttgag
atgcggcgagttgctgcttacatctataagaaagcaggtcgatggaggcaatcaattacg
ttatcgaagaaagacaatcactacaaagatgcaatggagacttgttcacagtctggggaa
cgcgaacttgcagaagaattgcttgtttatttcattgatcagggaaagaaggagtgtttt
gcctcgtgcttatttgtttgttatgatgtgatacgaccggatgttgcacttgaacttgca
tggatgaacaacatgatagactttgctttcccctatctcttacagtttatccgtgagtac
acaggcaaagttgatgagcttgtcaaggatagaatcgaagctcaaagtgaagttaaagcc
aaagagaaggaggagaaggatatggttgctcaacagaacatgtacgcacaactgcttccg
ctagccttgcctgctccaccagggatgggaggtatgggtgggggaggttatggtccccca
ccacctatggggggaatgggtatgcctccaatgccagcttttggaatgcctccaatgggc
agctattga
DBGET
integrated database retrieval system